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Add topological graph featurization pipeline for CurveEncoder + graph…#742

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feat-graph-transformer
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Add topological graph featurization pipeline for CurveEncoder + graph…#742
anna-grim wants to merge 1 commit into
mainfrom
feat-graph-transformer

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… model

  • Add graph_datamodules.py with TopoGraphInput, TopoGraphBatch, topological_decomposition, path_features, curve_to_diffs, and collate_topo_graphs
  • Refactor curve_datamodules.PathsDataset.getitem to use curve_to_diffs
  • Update merge_datamodules.BrainDataset.getitem to return TopoGraphInput

… model

- Add graph_datamodules.py with TopoGraphInput, TopoGraphBatch,
  topological_decomposition, path_features, curve_to_diffs, and
  collate_topo_graphs
- Refactor curve_datamodules.PathsDataset.__getitem__ to use curve_to_diffs
- Update merge_datamodules.BrainDataset.__getitem__ to return TopoGraphInput
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