Add topological graph featurization pipeline for CurveEncoder + graph…#742
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anna-grim wants to merge 1 commit into
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Add topological graph featurization pipeline for CurveEncoder + graph…#742anna-grim wants to merge 1 commit into
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… model - Add graph_datamodules.py with TopoGraphInput, TopoGraphBatch, topological_decomposition, path_features, curve_to_diffs, and collate_topo_graphs - Refactor curve_datamodules.PathsDataset.__getitem__ to use curve_to_diffs - Update merge_datamodules.BrainDataset.__getitem__ to return TopoGraphInput
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