Refactor encoder output#739
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July 21, 2026 22:46
- Fix merge site index-0 label bug (idx > 0 → idx >= 0) in get_site - Fix __len__ to compute count analytically instead of re-sampling each call - Cache fragment cable-length traversal in _compute_fragment_stats so find_fragments_to_search and estimate_iterations share one graph walk - Replace per-node is_near_leaf BFS with single multi-source BFS (compute_near_leaf_nodes) per component, reducing O(N²) to O(N) - Remove SEResConvBlock3D, SqueezeExcite3D, ConvNeXtDownBlock3D, ConvNeXtBlock3D, and CenterWeightedPool3D — underperforming on this task - Replace center-weighted pooling with standard avg+max pool at last 3 stages - Fix checkpoint save format to include config alongside state_dict so NewCNN3D.load can reconstruct the model without manual architecture setup - Fix CosineAnnealingLR T_max=25 → T_max=max_epochs for single decay
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