Register vcell-su download-vcml subcommand and resolve users by id#1675
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Register vcell-su download-vcml subcommand and resolve users by id#1675
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DatabaseCommand existed but was never wired into the AdminCLI subcommand list, so 'vcell-su download-vcml' was unreachable. Register it. Add a --userid option that resolves the User key via AdminDBTopLevel, so admins can fetch private biomodels by username alone instead of needing the userid:userkey pair. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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Summary
DatabaseCommand(thedownload-vcmladmin subcommand for fetching cached VCML directly from the database) existed invcell-admin/.../tools/DatabaseCommand.javabut was never wired into theAdminCLIsubcommand list, sovcell-su download-vcmlwas unreachable. This adds it.--userid <name>option that resolves the User key viaAdminDBTopLevel.getUser(...), so admins can fetch private biomodels by username alone instead of needing theuserid:userkeypair. The existing--user userid:keyoption still works.Why
Used during investigation of two biomodels failing to load from the primary Oracle DB. The existing tooling required the user-key (a numeric internal id), which we don't have for arbitrary users. With
--userid, an admin can fetch any private biomodel by--biomodel-id <id> --userid <name>.Test plan
mvn -pl vcell-admin -am compile -DskipTestscleanvcell-su -hlistsdownload-vcmlas a subcommandvcell-su download-vcml --biomodel-id=<id> --userid=<name> -o <dir> --regenerateXML=false --publishedOnly=falseretrieves the cached VCML for a private biomodel--user userid:keyform still works (regression check)🤖 Generated with Claude Code