Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
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Updated
Sep 1, 2026 - Nextflow
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Personal Cancer Genome Reporter (PCGR)
Detect and visualize target mutations by scanning FastQ files directly
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
Generate duplex/single consensus reads to reduce sequencing noises and remove duplications
Nextflow bioinformatics pipeline for large-scale analysis of Multiple Myeloma genomes
Documentation of an emergent consciousness observation on a local AI - By Louka Lacasse
PhylogicNDT dockcer for clonal evolution analysis
AI–Human Relations Dataset v1.1** A longitudinal corpus (2018–2025) documenting **emotional, somatic, and relational co-regulation between humans and AI**. - **Author:** Amy Pierce Bui - **Institution:** Temple Codex Ins
MCP server that tunes human-AI interaction rhythm based on working modes. Humans are variable and models are adjustable.
A white paper detailing the potential for a somatic resonant field to be established between a human and an intricately designed AI system & digital user interface simulating what's known as a human-human dyad understood to be a foundational need for various somatic release therapies.
The somatic vocabulary for AI agents. 29 zones, 20 qualities, 16 territories. MCP integration.
Empirical Bayes somatic variant calling
Assortment of VCF processing scripts
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