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Load a given dataset from CELLxGENE

load given dataset

Status: Open.

#24 In showteeth/GEfetch2R;

· showteeth opened on Jan 7, 2026

Check the availability of APIs (SRA/ENA, GEO, PanglanDB, UCSC Cell Browser, Zenodo, CELLxGENE, Human Cell Atlas)

API

Status: Open.

#23 In showteeth/GEfetch2R;

· showteeth opened on Jan 6, 2026

API changes in CELLxGENE

API

Status: Open.

#22 In showteeth/GEfetch2R;

· showteeth opened on Jan 4, 2026

API changes of Human Cell Atlas

API

Status: Open.

#21 In showteeth/GEfetch2R;

· showteeth opened on Jan 4, 2026

RData inspection and loading

enhancementNew feature or requestNew feature or request

Status: Open.

#20 In showteeth/GEfetch2R;

· showteeth opened on Dec 23, 2025

Processed objects (rdata, rds, h5ad, loom) in GEO

enhancementNew feature or requestNew feature or request

Large-scale evaluation

Status: Open.

#18 In showteeth/GEfetch2R;

· showteeth opened on Dec 19, 2025

Sample name is after the fixed name (GEO, 10x)

enhancementNew feature or requestNew feature or request

Large-scale evaluation

Status: Open.

#17 In showteeth/GEfetch2R;

· showteeth opened on Dec 17, 2025

Compressed files (zip, tar.gz, tar) in downloaded supplemental files (GEO, 10x)

enhancementNew feature or requestNew feature or request

Large-scale evaluation

Status: Open.

#16 In showteeth/GEfetch2R;

· showteeth opened on Dec 16, 2025

Load count matrix in h5 format from GEO (10x)

enhancementNew feature or requestNew feature or request

Large-scale evaluation

Status: Open.

#15 In showteeth/GEfetch2R;

· showteeth opened on Dec 16, 2025

Extract metadata from supplemental files (GEO)

enhancementNew feature or requestNew feature or request

Status: Open.

#14 In showteeth/GEfetch2R;

· showteeth opened on Dec 15, 2025

Load count matrix in mixed file formats from GEO (smart-seq2)

enhancementNew feature or requestNew feature or request

Large-scale evaluation

Status: Open.

#13 In showteeth/GEfetch2R;

· showteeth opened on Dec 15, 2025

Change the way of downloading supplemental files with index from GEO

enhancementNew feature or requestNew feature or request

Status: Open.

#12 In showteeth/GEfetch2R;

· showteeth opened on Dec 15, 2025