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SeqAn

SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data.

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  1. seqan3 seqan3 Public

    The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

    C++ 448 87

  2. seqan seqan Public

    SeqAn's official repository.

    C++ 500 173

Repositories

Showing 10 of 51 repositories
  • www.seqan.de Public
    seqan/www.seqan.de’s past year of commit activity
    SCSS 0 MIT 8 2 1 Updated Mar 6, 2026
  • seqan3 Public

    The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

    seqan/seqan3’s past year of commit activity
    C++ 448 87 30 3 Updated Mar 4, 2026
  • actions Public
    seqan/actions’s past year of commit activity
    Shell 0 CC-BY-4.0 3 0 0 Updated Mar 4, 2026
  • seqan Public

    SeqAn's official repository.

    seqan/seqan’s past year of commit activity
    C++ 500 173 104 5 Updated Mar 4, 2026
  • sharg-parser Public

    The modern argument parser for c++ tools

    seqan/sharg-parser’s past year of commit activity
    C++ 12 7 12 4 Updated Mar 3, 2026
  • dream-stellar Public

    Fast and exact local alignments

    seqan/dream-stellar’s past year of commit activity
    C++ 3 BSD-3-Clause 3 5 6 Updated Mar 3, 2026
  • seqan-std Public

    Implementation of several C++23 views

    seqan/seqan-std’s past year of commit activity
    C++ 0 2 0 0 Updated Mar 2, 2026
  • ScavengerHunt Public

    Unix Scavenger Hunt

    seqan/ScavengerHunt’s past year of commit activity
    Shell 0 4 0 0 Updated Mar 2, 2026
  • raptor Public

    A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.

    seqan/raptor’s past year of commit activity
    C++ 53 17 11 5 Updated Mar 2, 2026
  • needle Public

    A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences

    seqan/needle’s past year of commit activity
    C++ 14 9 7 2 Updated Mar 2, 2026
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