Biomedical Informatics at ETH Zurich
Popular repositories Loading
Repositories
- WiNN-for-technical-correction Public
Repository accompanying the WiNN paper, containing reproducible analysis notebooks for the simulation benchmark and public multi-batch dataset, together with code to reproduce benchmarking results, supplementary analyses, and figure/table generation for the manuscript.
- collinearity Public
- aestetik Public
AESTETIK: Convolutional autoencoder for learning spot representations from spatial transcriptomics and morphology data
- DeepSpot2Cell Public
DeepSpot2Cell: Predicting virtual single-cell spatial transcriptomics from H&E images using spot-level supervision
- sigmoni Public Forked from vikshiv/sigmoni
Nanopore signal-based classification using compressed indexing and matching statistics
- DeepSpot Public
DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and single-cell (Xenium) resolution.
- DeepSpotM Public
Multimodal foundation model predicting transcriptome-wide virtual spatial transcriptomics from histology.
Top languages
Loading…
Most used topics
Loading…