Skip to content

Pull requests: nf-core/modules

Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort

Pull requests list

octopusv bump versions + associated logic and test updates Ready for Review
#12503 opened Aug 3, 2026 by manascripts Member Loading…
8 of 17 tasks
Update to topic ncbitools
#12501 opened Aug 3, 2026 by LouisLeNezet Contributor Loading…
17 tasks
Update to topic nanomonsv
#12500 opened Aug 3, 2026 by LouisLeNezet Contributor Loading…
17 tasks
Update to topic nanocomp
#12499 opened Aug 3, 2026 by LouisLeNezet Contributor Loading…
17 tasks
Decouple orf_class from ORF length across the custom/orf* modules
#12498 opened Aug 3, 2026 by FelixKrueger Contributor Loading…
Update Infrastructural dependencies (major) size/s
#12497 opened Aug 3, 2026 by renovate Bot Loading…
2 tasks
updated module: xengsort/index Ready for Review
#12494 opened Aug 2, 2026 by LeonHornich Contributor Loading…
10 of 13 tasks
remove setting of bowtie2_index to an empty channel
#12490 opened Aug 1, 2026 by emmanuel-tan Loading…
19 tasks done
Update nvcr.io/nvidia/tensorflow Docker tag to v20.12 size/xs
#12488 opened Aug 1, 2026 by renovate Bot Loading…
2 tasks
Update dependency prettier to v3.9.6 size/xs
#12487 opened Aug 1, 2026 by renovate Bot Loading…
2 tasks
Migrate amulety to topics gpu module uses GPU help wanted Extra attention is needed
#12481 opened Jul 31, 2026 by atrigila Contributor Draft Adopt topic channels in all nf-core modules
Deep mased imp modules
#12472 opened Jul 31, 2026 by SkyLexS Contributor Loading…
10 of 17 tasks
canvas/germline: Added tests and missing inputs, some cleanup
#12462 opened Jul 29, 2026 by Schmytzi Contributor Draft
9 of 17 tasks
Update module mobster
#12460 opened Jul 29, 2026 by valerianilucrezia Contributor Loading…
11 of 17 tasks
Add a new module - gridss/extractoverlappingfragments ready to merge
#12450 opened Jul 28, 2026 by imsarath Contributor Loading…
13 of 17 tasks
Update bcftools/consensus/main.nf
#12449 opened Jul 28, 2026 by unholyparrot Loading…
17 tasks
Migrate narfmap/hashtable to topic channels
#12445 opened Jul 27, 2026 by xHaMMaDy Contributor Loading…
13 tasks done
fix(qualimap) Fix for errors in qualimap when memory is set to null
#12441 opened Jul 27, 2026 by bigbigdumdum Loading…
2 of 11 tasks
fix #12426 Ready for Review
#12427 opened Jul 24, 2026 by SimHolz Loading…
fmhfunprofiler: fix test data and update snapshot size/m
#12417 opened Jul 24, 2026 by nickp60 Contributor Loading…
12 of 17 tasks
Propr topics size/xl
#12387 opened Jul 20, 2026 by SPPearce Contributor Loading…
Fix strict syntax in utils_* subworkflows
#12329 opened Jul 9, 2026 by itrujnara Contributor Loading…
2 of 4 tasks
ProTip! Updated in the last three days: updated:>2026-07-31.