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@meringlab

Christian von Mering's lab

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  1. FlashWeave.jl FlashWeave.jl Public

    Inference of microbial interaction networks from large-scale heterogeneous abundance data

    Julia 95 10

  2. MicrobeAtlasWebsite MicrobeAtlasWebsite Public

    8

  3. string-mcp string-mcp Public

    STRING MCP server

    Python 7 3

  4. Bio334 Bio334 Public

    Bio334 Public student repository

    TeX 6 10

  5. og_consistency_pipeline og_consistency_pipeline Public

    Consistency pipeline for hierarchies of orthologous groups (OGs) based on subsampling and tree reconciliation

    Python 5 3

  6. cellbase-docker cellbase-docker Public

    dockerised opencb/cellbase

    Perl 2 1

Repositories

Showing 10 of 25 repositories
  • mcp-workshop Public
    meringlab/mcp-workshop's past year of commit activity
    Python 0 27 0 0 Updated Sep 3, 2026
  • string-mcp Public

    STRING MCP server

    meringlab/string-mcp's past year of commit activity
    Python 7 MIT 3 0 0 Updated Aug 20, 2026
  • Bio334 Public

    Bio334 Public student repository

    meringlab/Bio334's past year of commit activity
    TeX 6 10 0 0 Updated May 13, 2026
  • MicrobeAtlas_companion Public

    Code and additional supplementary data for Rodrigues, Tackmann et al. (2025)

    meringlab/MicrobeAtlas_companion's past year of commit activity
    Jupyter Notebook 1 MIT 1 0 0 Updated Jan 20, 2026
  • paxdb-issues Public

    🧩 PaxDb Issues Welcome to the PaxDb Issue Tracker — the central place to report, discuss, and track issues related to PaxDb, the Protein Abundance Database.

    meringlab/paxdb-issues's past year of commit activity
    0 0 0 0 Updated Nov 10, 2025
  • FlashWeave.jl Public

    Inference of microbial interaction networks from large-scale heterogeneous abundance data

    meringlab/FlashWeave.jl's past year of commit activity
    Julia 95 10 8 (1 issue needs help) 0 Updated Oct 9, 2025
  • meringlab/paxdb-data-pipeline's past year of commit activity
    Python 0 0 4 0 Updated Jul 26, 2024
  • MAPseq Public Forked from jfmrod/MAPseq

    highthroughput rRNA sequence classification and OTU mapping for metagenomic samples

    meringlab/MAPseq's past year of commit activity
    C 0 8 0 0 Updated Jun 7, 2024
  • MAPseq_clone Public
    meringlab/MAPseq_clone's past year of commit activity
    C 0 0 0 0 Updated May 2, 2024
  • react-map-web Public
    meringlab/react-map-web's past year of commit activity
    JavaScript 0 0 0 0 Updated Aug 3, 2023

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