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Regenerate derived files #68

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2,717 changes: 2,714 additions & 3 deletions docs/schema/valuesets.yaml
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403 changes: 403 additions & 0 deletions project/jsonschema/valuesets.schema.json
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746 changes: 746 additions & 0 deletions src/valuesets/datamodel/valuesets.py
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746 changes: 746 additions & 0 deletions src/valuesets/datamodel/valuesets_pydantic.py
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17 changes: 17 additions & 0 deletions src/valuesets/enums/__init__.py
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Original file line number Diff line number Diff line change
Expand Up @@ -43,11 +43,13 @@
from .bio.insdc_geographic_locations import InsdcGeographicLocationEnum
from .bio.insdc_missing_values import InsdcMissingValueEnum
from .bio.lipid_categories import RelativeTimeEnum, PresenceEnum, LipidCategory
from .bio.pato import ColorEnum, ShapeEnum, RelativeChangeEnum, IntensityEnum, TextureEnum, PATOBiologicalSexEnum, MaturityEnum, ViabilityEnum, CellularityEnum, SpatialPatternEnum
from .bio.plant_biology import PlantSexualSystem
from .bio.plant_developmental_stages import PlantDevelopmentalStage
from .bio.plant_experimental_conditions import PlantStudyConditionEnum, SeasonalEnvironmentExposureEnum, EcologicalEnvironmentExposureEnum, PlantGrowthMediumExposureEnum
from .bio.plant_sex import PlantSexEnum
from .bio.protein_evidence import ProteinEvidenceForExistence, RefSeqStatusType
from .bio.protein_structure_features import SecondaryStructureType, LocalStructuralFeature
from .bio.proteomics_standards import RelativeTimeEnum, PresenceEnum, PeakAnnotationSeriesLabel, PeptideIonSeries, MassErrorUnit
from .bio.psi_mi import InteractionDetectionMethod, InteractionType, ExperimentalRole, BiologicalRole, ParticipantIdentificationMethod, FeatureType, InteractorType, ConfidenceScore, ExperimentalPreparation
from .bio.relationship_to_oxygen import RelToOxygenEnum
Expand Down Expand Up @@ -181,6 +183,7 @@

# Lab_Automation domain
from .lab_automation.autonomous_labs import AutonomousLabComponentType, ExperimentalDesignMethodType, LabAutomationWorkflowType
from .lab_automation.cloud_lab import RelativeTimeEnum, PresenceEnum, LabUnitOperationEnum, CloudLabExperimentEnum
from .lab_automation.devices import LaboratoryDeviceTypeEnum, RoboticArmTypeEnum
from .lab_automation.labware import MicroplateFormatEnum, ContainerTypeEnum, PlateMaterialEnum, PlateCoatingEnum
from .lab_automation.operations import LiquidHandlingOperationEnum, SampleProcessingOperationEnum
Expand Down Expand Up @@ -326,13 +329,16 @@
"CellCycleRegulator",
"CellPolarity",
"CellProliferationState",
"CellularityEnum",
"ChipFabricationNodeType",
"ChiralityEnum",
"ChromatographyType",
"ChurnClassificationEnum",
"CitationStyle",
"ClinicalBehavioralAssayEnum",
"CloudLabExperimentEnum",
"CodonEnum",
"ColorEnum",
"ColorSpaceEnum",
"CommonMineral",
"CommonOrganismTaxaEnum",
Expand Down Expand Up @@ -541,6 +547,7 @@
"InspectionTypeEnum",
"IntegrationFeatureEnum",
"IntegrationSystemEnum",
"IntensityEnum",
"IntentClassificationEnum",
"InteractionDetectionMethod",
"InteractionType",
Expand All @@ -550,6 +557,7 @@
"JobLevelEnum",
"KaryotypicSexEnum",
"LabAutomationWorkflowType",
"LabUnitOperationEnum",
"LaboratoryDeviceTypeEnum",
"LabwareStandardEnum",
"LanguageCodeISO6391enum",
Expand All @@ -563,6 +571,7 @@
"LicensingStageEnum",
"LipidCategory",
"LiquidHandlingOperationEnum",
"LocalStructuralFeature",
"LogisticsOperationEnum",
"MLDataType",
"MLFieldRole",
Expand Down Expand Up @@ -590,6 +599,7 @@
"MaterialClassEnum",
"MaterialPropertyPredictionType",
"MaterialsSimulationType",
"MaturityEnum",
"MechanicalBehaviorEnum",
"MechanicalTestingMethodEnum",
"MedicalSpecialtyEnum",
Expand Down Expand Up @@ -665,6 +675,7 @@
"OutcomeTypeEnum",
"OxidationStateEnum",
"OxygenationStrategyEnum",
"PATOBiologicalSexEnum",
"PCROperationTypeEnum",
"PCRPlateTypeEnum",
"PVCellType",
Expand Down Expand Up @@ -753,6 +764,7 @@
"RegulatoryConstraint",
"RegulatoryFrameworkEnum",
"RelToOxygenEnum",
"RelativeChangeEnum",
"RelativeDirection",
"RelativeTimeEnum",
"RemoteSensingDataType",
Expand All @@ -775,6 +787,7 @@
"SchedulerTypeEnum",
"Season",
"SeasonalEnvironmentExposureEnum",
"SecondaryStructureType",
"SectionLocationEnum",
"SemiconductorMaterialType",
"SensorWhileDrillingFeature",
Expand All @@ -792,6 +805,7 @@
"SequencingChemistry",
"SequencingPlatform",
"SeverityLevelEnum",
"ShapeEnum",
"SimpleSpatialDirection",
"SkinToneEnum",
"SmartManufacturingTechnologyType",
Expand All @@ -801,6 +815,7 @@
"SourceMaterialTypeEnum",
"SourcingStrategyEnum",
"SpamClassificationEnum",
"SpatialPatternEnum",
"SpatialRelationship",
"SpatialResolutionEnum",
"SpecimenCollectionMethodEnum",
Expand Down Expand Up @@ -838,6 +853,7 @@
"TemperatureUnitEnum",
"TemporalAggregationEnum",
"TextCharset",
"TextureEnum",
"TherapeuticActionabilityEnum",
"ThermalAnalysisMethodEnum",
"ThermalConductivityEnum",
Expand Down Expand Up @@ -877,6 +893,7 @@
"ValueSetStewardEnum",
"VectorTypeEnum",
"VendorCategoryEnum",
"ViabilityEnum",
"VideoFormatEnum",
"ViralGenomeTypeEnum",
"VisitProvenanceEnum",
Expand Down
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