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Pull requests: deeptools/deepTools

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Pull requests list

plotPCA: write and plot the per-sample loadings in the untransposed layout
#1460 opened Sep 5, 2026 by cindykrafft Loading…
2 of 4 tasks
1
bamCompare: compute --operation first/second/add/mean and orient reciprocal_ratio as documented
#1458 opened Sep 5, 2026 by cindykrafft Loading…
2 of 4 tasks
1
plotHeatmap: add --plotColors argument for profile plot line colors
#1427 opened May 21, 2026 by niekwit Loading…
[computeMatrixOperations] Add "arithmetic" and "mean" functions to combine sets of matrices generated with computeMatrix before plotting with plotHeatmap
#1419 opened Sep 29, 2025 by VonAlphaBisZulu Loading…
np.warnings is deprecated
#1412 opened Jul 16, 2025 by vivekbhr Member Loading…
1 of 4 tasks
Fixed erroneous args.args in silhouette option of plotHeatmap.py
#1394 opened Apr 15, 2025 by meekrob Loading…
3 tasks
added support for warnings stdlib
#1393 opened Apr 14, 2025 by AdriTara Loading…
4 tasks done
Dev compute matrix strand 20220301
#1128 opened Mar 1, 2022 by joshtburdick Loading…
1 of 4 tasks
Adding independent ranges by sample option: for zMax zMin yMin and y…
#1116 opened Jan 20, 2022 by organic-chemistry Loading…
3 tasks
1
move legend to up and fix y-axis inward if using different ymax
#1078 opened Jun 30, 2021 by xubeisi Loading…
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