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feat(dpmodel): NeighborGraph 3-body angle machinery (PR-E)#5717

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feat(dpmodel): NeighborGraph 3-body angle machinery (PR-E)#5717
wanghan-iapcm wants to merge 18 commits into
deepmodeling:masterfrom
wanghan-iapcm:feat-graph-angles-prE

test(pt_expt): restore sys.modules snapshot in plugin entry-point test

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succeeded Jul 4, 2026 in 5s