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Perplexity_Isoform_MasterTable
Perplexity_Isoform_MasterTable PublicScripts for long-read rna-seq analysis pipeline and master table generation
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PerturbODE
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Repositories
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This repo contains all scripts, notebooks and analysis related to running and benchmarking our method Leaflet.
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LeafletFA modules for mapping alternative splicing events from splice junction files and visualization.
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- IsoformGazer Public
A webtool for visualizing alternative RNA isoforms across integrated long-read RNA-seq and pseudobulked single-cell short-read RNA-seq data.
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Scripts for long-read rna-seq analysis pipeline and master table generation
- PerturbODE Public
PerturbODE: Interpretable Neural ODEs for Gene Regulatory Network Discovery under Perturbations
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