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Update Zenodo entry upon release - #345

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Update Zenodo entry upon release#345
samumantha wants to merge 1 commit into
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zenodo

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@samumantha

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Currently untested, therefore draft PR! Will still do some testing before marking ready to merge. But if anyone has comments/ thoughts already, they are very welcome :)

  • Using CodeRefinery Zenodo account (SW has details)
  • Gets lesson metadata from CITATION.cff as part of the workflow
  • Uses existing lesson DOI as base to add new version to.

If we get the Bioschemas PR #344 merged first, could add some more metadata. Not a necessity though.

@samumantha

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@rkdarst you were interested in the automation of the Zenodo deposit. Would you like to test this implementation with Zenodo sandbox?

@rkdarst

rkdarst commented Jul 29, 2026

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I browsed the Python code and it seems reasonable. The action looks reasonable too. I didn't read in-depth but I guess you can check that part. I'd say go ahead and work on it. I wouldn't wait for me to do checking.

At the end I would do detailed checks of how the secrets and releases are protected. I have a feeling there might be more we can do, but don't remember details now. Or even if there really was something... maybe it's something else I remember.

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