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build(deps): bump the pip-dependencies group in /docker with 5 updates#3093

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Bumps the pip-dependencies group in /docker with 5 updates:

Package From To
geopandas 1.1.2 1.1.3
jupyterlab 4.5.9 4.6.0
pandas 2.3.3 3.0.3
pydeck 0.9.1 0.9.2
rasterio 1.4.4 1.5.0

Updates geopandas from 1.1.2 to 1.1.3

Release notes

Sourced from geopandas's releases.

Version 1.1.3

What's Changed

This release addresses a handful of small compatibility issues with pandas 3.0 and backports some bugfixes.

Bug fixes:

  • Improved compatibility with pandas 3.0 Copy-on-Write feature, making use of deferred copies where possible (#3298, #3711).
  • Fix GeoSeries.sample_points not accepting list-like size when generating points using pointpaterns (#3710).
  • Fix from_wkt/wkb to correctly handle missing values with pandas 3 (where the new str dtype is used) (#3714).
  • Fix to_postgis to correctly handle missing values with pandas 3 (where the new str dtype is used) (#3722).
  • Using loc to assign column values to a new row index now correctly preserves the column CRS and geometry dtype on pandas 3.1, due to an upstream bug fix (#3741, Pandas #62523)
  • Random states in pointpats methods of sample_points can now be fixed with rng (#3737).

Full Changelog: geopandas/geopandas@v1.1.2...v1.1.3

Changelog

Sourced from geopandas's changelog.

Version 1.1.3 (March 10, 2026)

This release addresses a handful of small compatibility issues with pandas 3.0 and backports some bugfixes.

Bug fixes:

  • Improved compatibility with pandas 3.0 Copy-on-Write feature, making use of deferred copies where possible (#3298, #3711).
  • Fix GeoSeries.sample_points not accepting list-like size when generating points using pointpaterns (#3710).
  • Fix from_wkt/wkb to correctly handle missing values with pandas 3 (where the new str dtype is used) (#3714).
  • Fix to_postgis to correctly handle missing values with pandas 3 (where the new str dtype is used) (#3722).
  • Using loc to assign column values to a new row index now correctly preserves the column CRS and geometry dtype on pandas 3.1, due to an upstream bug fix (#3741, Pandas #62523)
  • Random states in pointpats methods of sample_points`` can now be fixed with rng` (#3737).
Commits
  • f5fe3ff RLS: v1.1.3
  • c104670 pointpats <2.5.3 test compat
  • af36b14 ENH: add pointpats as an optional dependency & pass in rng (#3737)
  • d9ed84a COMPAT: fix failing test for loc concatenation crs preservation with pandas 3...
  • 1b1ddc2 MAINT: use trusted publishing for releasing to PyPI (#3734)
  • 8d0c05d changelog
  • a424f17 Avoid returning deep copies with pandas 3.0 (with Copy-on-Write) (#3298)
  • 03fa43e MAINT: cleanup release warning for project.license table (#3603)
  • 29fdb30 CI: remove usage of PANDAS_FUTURE_INFER_STRINGS=0 (#3715)
  • 9070e13 missing changelog entries
  • Additional commits viewable in compare view

Updates jupyterlab from 4.5.9 to 4.6.0

Release notes

Sourced from jupyterlab's releases.

v4.6.0

4.6.0

New features added

Deprecated features

Enhancements made

... (truncated)

Commits

Updates pandas from 2.3.3 to 3.0.3

Release notes

Sourced from pandas's releases.

pandas 3.0.3

We are pleased to announce the release of pandas 3.0.3. This is a patch release in the 3.0.x series and includes some regression fixes and bug fixes. We recommend that all users of the 3.0.x series upgrade to this version.

See the full whatsnew for a list of all the changes.

Pandas 3.0 supports Python 3.11 and higher. The release can be installed from PyPI:

python -m pip install --upgrade pandas==3.0.*

Or from conda-forge

conda install -c conda-forge pandas=3.0

Please report any issues with the release on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

pandas 3.0.2

We are pleased to announce the release of pandas 3.0.2. This is a patch release in the 3.0.x series and includes some regression fixes and bug fixes. We recommend that all users of the 3.0.x series upgrade to this version.

See the full whatsnew for a list of all the changes.

Pandas 3.0 supports Python 3.11 and higher. The release can be installed from PyPI:

python -m pip install --upgrade pandas==3.0.*

Or from conda-forge

conda install -c conda-forge pandas=3.0

Please report any issues with the release on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

pandas 3.0.1

We are pleased to announce the release of pandas 3.0.1. This is a patch release in the 3.0.x series and includes some regression fixes and bug fixes. We recommend that all users of the 3.0.x series upgrade to this version.

See the full whatsnew for a list of all the changes.

Pandas 3.0.0 supports Python 3.11 and higher. The release can be installed from PyPI:

python -m pip install --upgrade pandas==3.0.*

Or from conda-forge

... (truncated)

Commits
  • 72f2fea RLS: 3.0.3 (#65590)
  • 2897590 Backport PR #65436 on branch 3.0.x (Account for privatization of matplotlib `...
  • 49894b5 Backport PR #65499 on branch 3.0.x (BUG: fix check if pyarrow is installed in...
  • 1c6d1e3 [backport 3.0.x] PERF: remove special casing for zoneinfo in tz_localize_to_u...
  • 2a54711 Backport PR #64379 on branch 3.0.x (PERF: improve performance with ZoneInfo t...
  • 036bb7c Backport PR #65482 on branch 3.0.x (PERF: don't call unique on dtypes for che...
  • bf4c182 Backport PR #65410 on branch 3.0.x (TST: also convert str index to object in ...
  • dd02d75 [backport 3.0.x] BUG: keep fsspec OpenFile alive for chained URL reads (#6547...
  • aef3d0f [backport 3.0.x] CI: lowercase types-pymysql/types-pyyaml to fix mamba 2.6.0 ...
  • bb8e248 Backport PR #65399 on branch 3.0.x (DOC: fix source link for classes in the r...
  • Additional commits viewable in compare view

Updates pydeck from 0.9.1 to 0.9.2

Commits

Updates rasterio from 1.4.4 to 1.5.0

Release notes

Sourced from rasterio's releases.

1.5.0

Dependencies:

  • Minimum supported versions: Python 3.12+, GDAL 3.8+, & numpy 2+ (#3465, #3467, #3468)
  • Vendor click-plugins (#3367)

Enhancements:

  • Add float16 dtype (#3469)
  • rasterio.cache: Add invalidate() and invalidate_all() for invalidation of responses in Rasterio's HTTP cache (#3276).
  • rasterio.crs: The CRS class has a new, lazily computed, geodetic_crs property (#3218)
  • rasterio.enum: Add Interleaving.tile (#3479)
  • rasterio.features.shapes: float64 fully supported GDAL 3.12.1 (#3477)
  • rasterio.features.shapes: Add uint32,uint64,int64 dtypes & warn for possible truncation (#3456)
  • rasterio.plot.show: Add indexes & percent_range parameters to handle rgb image missing color interpretation & enable histogram stretching (#3171)
  • rasterio.warp.reproject: Modify tolerance to be an argument in (#3325)
  • Move project metadata to pyproject.toml (PEP 621) (#3430)
  • Use Lapack solve to more accurately compute affine reverse transforms (#3315)
  • rasterio.open: Add thread_safe parameter (#3496)
  • rasterio.session: Add support for additional Azure credentials (#3482)

Bug fixes:

  • Ensure dataset can be closed multiple times (#3480)
  • Remove duplicate dataset cleanup (#3473, #3366)
  • Use rasterio & numpy dtypes internally instead of strings (#3472)
  • Use context manager for MemoryDataset (#3461)
  • rasterio.warp: Don't fill masked output when reprojecting (#3471)
  • rasterio.warp: Filter GDALCreateGenImgProjTransformer2 options (#3460)
  • rasterio.show_versions: Use importlib.metadata.version (#3488)
  • Static GDAL runtime version check (#3487)
  • Use GDAL open flag constants (#3494)
  • Documentation (#3459, #3458, #3455, #3346)
  • Tests (#3429, #3502, #3501, #3498)
  • Code linting (#3457)

Deprecations:

  • rasterio.warp.transform_geom: Deprecate antimeridian_cutting & antimeridian_offset (#3474)

Packaging notes:

Full list of software versions

Contributors

... (truncated)

Changelog

Sourced from rasterio's changelog.

1.5.0 (2026-01-05)

Dependencies:

  • Minimum supported versions: Python 3.12+, GDAL 3.8+, & numpy 2+ (#3465, #3467, #3468)
  • Vendor click-plugins (#3367)

Enhancements:

  • Add float16 dtype (#3469)
  • rasterio.cache: Add invalidate() and invalidate_all() for invalidation of responses in Rasterio's HTTP cache (#3276).
  • rasterio.crs: The CRS class has a new, lazily computed, geodetic_crs property (#3218)
  • rasterio.enum: Add Interleaving.tile (#3479)
  • rasterio.features.shapes: float64 fully supported GDAL 3.12.1 (#3477)
  • rasterio.features.shapes: Add uint32,uint64,int64 dtypes & warn for possible truncation (#3456)
  • rasterio.plot.show: Add indexes & percent_range parameters to handle rgb image missing color interpretation & enable histogram stretching (#3171)
  • rasterio.warp.reproject: Modify tolerance to be an argument in (#3325)
  • Move project metadata to pyproject.toml (PEP 621) (#3430)
  • Use Lapack solve to more accurately compute affine reverse transforms (#3315)
  • rasterio.open: Add thread_safe parameter (#3496)
  • rasterio.session: Add support for additional Azure credentials (#3482)

Bug fixes:

  • Ensure dataset can be closed multiple times (#3480)
  • Remove duplicate dataset cleanup (#3473, #3366)
  • Use rasterio & numpy dtypes internally instead of strings (#3472)
  • Use context manager for MemoryDataset (#3461)
  • rasterio.warp: Don't fill masked output when reprojecting (#3471)
  • rasterio.warp: Filter GDALCreateGenImgProjTransformer2 options (#3460)
  • rasterio.show_versions: Use importlib.metadata.version (#3488)
  • Static GDAL runtime version check (#3487)
  • Use GDAL open flag constants (#3494)
  • Documentation (#3459, 3458, #3455, #3346)
  • Tests (#3429, #3502, #3501, #3498)
  • Code linting (#3457)

Deprecations:

  • rasterio.warp.transform_geom: Deprecate antimeridian_cutting & antimeridian_offset (#3474)

Packaging notes:

Full list of software versions: https://github.com/rasterio/rasterio/blob/1.5.0/ci/config.sh#L1-L25

Full Changelog: rasterio/rasterio@1.4.4...1.5.0

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@dependabot
build(deps): bump the pip-dependencies group in /docker with 5 updates
ec7604b 
Bumps the pip-dependencies group in /docker with 5 updates:

| Package | From | To |
| --- | --- | --- |
| [geopandas](https://github.com/geopandas/geopandas) | `1.1.2` | `1.1.3` |
| [jupyterlab](https://github.com/jupyterlab/jupyterlab) | `4.5.9` | `4.6.0` |
| [pandas](https://github.com/pandas-dev/pandas) | `2.3.3` | `3.0.3` |
| [pydeck](https://github.com/visgl/deck.gl) | `0.9.1` | `0.9.2` |
| [rasterio](https://github.com/rasterio/rasterio) | `1.4.4` | `1.5.0` |


Updates `geopandas` from 1.1.2 to 1.1.3
- [Release notes](https://github.com/geopandas/geopandas/releases)
- [Changelog](https://github.com/geopandas/geopandas/blob/main/CHANGELOG.md)
- [Commits](geopandas/geopandas@v1.1.2...v1.1.3)

Updates `jupyterlab` from 4.5.9 to 4.6.0
- [Release notes](https://github.com/jupyterlab/jupyterlab/releases)
- [Changelog](https://github.com/jupyterlab/jupyterlab/blob/main/RELEASE.md)
- [Commits](https://github.com/jupyterlab/jupyterlab/compare/@jupyterlab/lsp@4.5.9...@jupyterlab/lsp@4.6.0)

Updates `pandas` from 2.3.3 to 3.0.3
- [Release notes](https://github.com/pandas-dev/pandas/releases)
- [Commits](pandas-dev/pandas@v2.3.3...v3.0.3)

Updates `pydeck` from 0.9.1 to 0.9.2
- [Release notes](https://github.com/visgl/deck.gl/releases)
- [Changelog](https://github.com/visgl/deck.gl/blob/master/CHANGELOG.md)
- [Commits](https://github.com/visgl/deck.gl/commits)

Updates `rasterio` from 1.4.4 to 1.5.0
- [Release notes](https://github.com/rasterio/rasterio/releases)
- [Changelog](https://github.com/rasterio/rasterio/blob/main/CHANGES.txt)
- [Commits](rasterio/rasterio@1.4.4...1.5.0)

---
updated-dependencies:
- dependency-name: geopandas
  dependency-version: 1.1.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: pip-dependencies
- dependency-name: jupyterlab
  dependency-version: 4.6.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: pip-dependencies
- dependency-name: pandas
  dependency-version: 3.0.3
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: pip-dependencies
- dependency-name: pydeck
  dependency-version: 0.9.2
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: pip-dependencies
- dependency-name: rasterio
  dependency-version: 1.5.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: pip-dependencies
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot Bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Jul 1, 2026
@dependabot dependabot Bot requested a review from jiayuasu as a code owner July 1, 2026 00:12
@dependabot dependabot Bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Jul 1, 2026
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