Specify openbabel >= 3 in environment.yml

[alongd]

This is a twin PR for ReactionMechanismGenerator/RMG-Py#2088 and ReactionMechanismGenerator/ARC#451

[alongd]

@kspieks,
the problem seems to be:

>       self.phaseDict = rms.readinput(self.rms_file)
E       NameError: name 'rms' is not defined

Would be great if you could take a look

[kspieks]

Sure I'll set up a fresh install of the latest master branch of T3, ARC, RMG-Py, RMG-database and try debugging. It seems that once again the problem is with pyrms haha. I'd guess this line is failing from one of our adapters.

1. Do all other unit tests pass if we ignore the RMS simulate adapters and temporarily comment out these lines?
2. As a minor idea, maybe we should move this logger error higher up in the file since there's no point trying to set up the adapter if these imports fail

[lgtm-com]

This pull request introduces 3 alerts when merging 6bcd5e0 into f643b7c - view on LGTM.com

new alerts:

• 3 for Wrong number of arguments in a call

[lgtm-com]

This pull request introduces 3 alerts when merging 178a43e into f643b7c - view on LGTM.com

new alerts:

• 3 for Wrong number of arguments in a call

[lgtm-com]

This pull request introduces 3 alerts when merging 89729f6 into f643b7c - view on LGTM.com

new alerts:

• 3 for Wrong number of arguments in a call