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add test data for freyja data with pathogen specified #382

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7 changes: 7 additions & 0 deletions data/modules/freyja/pathogen_specified/rsv_sample.demix_out.tsv
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variant_files/sample3.demix_out.tsv
summarized [('BQ.1* [Omicron (BQ.1.X)]', 0.9836862475443224), ('Omicron', 0.011029767835432084)]
lineages DN.1.1 BQ.1.1.44 BQ.1.1.6 BQ.1.1.53 BQ.1.1.52 BQ.1.22 BQ.1.1.19 BQ.1.1.58 BQ.1.1.37 BQ.1.1.1 BQ.1.1.4 BQ.1.1.36 BQ.1.18 BQ.1.1.45 BQ.1.1.3 BQ.1.1.10 BQ.1.1.18 BQ.1.1.64 BQ.1.1.46 BQ.1.1.50 DT.2 BQ.1.1.66 BQ.1.1.47 BQ.1.1.68 BQ.1.1.67 BQ.1.9 BQ.1.24 BQ.1.1 XBS BQ.1.1.32 BQ.1.1.69 BQ.1.1.16 BQ.1.1.17 BQ.1.1.14 BQ.1.1.40 BQ.1.1.51 BQ.1.1.24 BQ.1.1.9 BQ.1.1.13 BQ.1.1.15 BQ.1.1.22 BQ.1.1.56 BQ.1.1.31 BQ.1.1.21 DT.3 BQ.1.1.62 EH.1 EE.5 DR.1 BQ.1.1.2 BQ.1.1.59 BQ.1.1.48 BQ.1.1.49 BQ.1.1.23 ED.3 ED.2 ED.1 BQ.1.1.7 BQ.1.1.61 BQ.1.1.43 EN.1 BQ.1.1.41 BQ.1.1.28 BQ.1.1.54 BQ.1.1.27 DU.1 DN.1 EE.2 EE.1 BQ.1.1.8 EE.4 BQ.1.1.63 EF.1 EF.2 BQ.1.1.39 BQ.1.1.60 BQ.1.1.20 BQ.1.1.70 BQ.1.1.42 BQ.1.1.57 BQ.1.1.38 BQ.1.1.55 BQ.1.1.65 BQ.1.1.29 EA.1 BQ.1.1.5 BQ.1.1.35 CZ.2 EE.3 BQ.1.19 CW.1
abundances 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.01102977 0.00203691
resid 0.06712715121973137
coverage 1.8392803397652409
pathogen RSV-A