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@GaTechBrownLab

The Brown Lab @ Georgia Tech

Research on Microbial Dynamics & Disease

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  1. Rattray-2023-PLOSCompBio Rattray-2023-PLOSCompBio Public

    Downsampled raw colony images

    Jupyter Notebook 2 1

  2. hierarchy hierarchy Public

    Quantitative modeling of multi-signal quorum sensing maps environment to bacterial regulatory responses

    MATLAB 2

  3. Worm_Tracking Worm_Tracking Public

    A pipeline to analyze microscope images of C. elegans

    1

  4. sbalance sbalance Public

    Structural Balance in Polymicrobial Networks

    1

  5. qsmodels qsmodels Public archive

    Mathematical Models of Quorum Sensing

    Mathematica 1

  6. pa_genomics pa_genomics Public

    Forked from jccastrog/pa_genomics

    R 1

Repositories

Showing 10 of 14 repositories
  • hierarchy Public

    Quantitative modeling of multi-signal quorum sensing maps environment to bacterial regulatory responses

    GaTechBrownLab/hierarchy’s past year of commit activity
    MATLAB 2 0 0 0 Updated Sep 7, 2025
  • PyocinTyper Public

    Type pyocins of Pseudomonas aeruginosa.

    GaTechBrownLab/PyocinTyper’s past year of commit activity
    Nextflow 0 1 0 0 Updated Aug 12, 2025
  • Galleria_Survival Public

    Analysis for the experiments with Galleria-Pseudomonas model system.

    GaTechBrownLab/Galleria_Survival’s past year of commit activity
    R 0 MIT 1 0 0 Updated May 31, 2025
  • metaAnalysis Public
    GaTechBrownLab/metaAnalysis’s past year of commit activity
    R 0 MIT 1 0 0 Updated Mar 28, 2025
  • phage-community-dynamics Public
    GaTechBrownLab/phage-community-dynamics’s past year of commit activity
    MATLAB 0 0 0 0 Updated Feb 6, 2024
  • Rattray-2023-PLOSCompBio Public

    Downsampled raw colony images

    GaTechBrownLab/Rattray-2023-PLOSCompBio’s past year of commit activity
    Jupyter Notebook 2 1 0 0 Updated Oct 17, 2023
  • Freq_of_Pa_QS_mutations_2021 Public

    Code for O'Connor et al., 2022: https://www.biorxiv.org/content/biorxiv/early/2022/07/27/2021.02.22.432365.full.pdf

    GaTechBrownLab/Freq_of_Pa_QS_mutations_2021’s past year of commit activity
    R 0 0 0 0 Updated Dec 13, 2022
  • commensal_resistance Public
    GaTechBrownLab/commensal_resistance’s past year of commit activity
    MATLAB 0 0 0 0 Updated Sep 30, 2022
  • Rattray-2022 Public

    Analysis supplement for Rattray et al., 2022

    GaTechBrownLab/Rattray-2022’s past year of commit activity
    0 0 0 0 Updated Apr 26, 2022
  • Varga-et-al_CompetitiveAbxRelease_SRA-upload Public

    Processing pipeline for SRA upload from raw data

    GaTechBrownLab/Varga-et-al_CompetitiveAbxRelease_SRA-upload’s past year of commit activity
    R 0 MIT 0 0 0 Updated Aug 4, 2021
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