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Read ShapePipe v1 and v2 products side by side - #343

Merged

cailmdaley merged 41 commits into

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feat/v2-catalogue-readers

Oct 2, 2026

Commits on Sep 28, 2026

catalog: metacal bitmasks use FITS format K, not I or the dead FLAGS_ key

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a6cb3c1
catalog: metacal bitmasks as int32; reduce_mem never narrows integers

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469d82a
catalog: layout-agnostic campaign and star catalogue readers

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9423e93
galaxy: replace IMAFLAGS_ISO cut with config-driven mask columns

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c755cdd
retire patch logic (#340)

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afbc457
tests: campaign readers, mask cut, and campaign merge

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df6f1ac
catalog: safe, low-memory campaign reading and merging

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db93958
config: v2 mask configuration with the MASK_n* columns

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03e1dac
scripts: finish the campaign rename in configs and entry points

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e75f5cb
tests, docs: pin row order, cover the new failure modes

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7f73c83
catalog: promote dtypes across tiles, stream the campaign merge

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5c4a636
config: restore the r-band coverage cut in the v2 mask config

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335b1a7
scripts: cheaper star mask cut, campaign-derived leakage labels

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1fbc27a
masks: treat n64 as a reason bit, not r-band coverage

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81fc03e
ruff autofix (format + safe lint fixes)

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98f68a0
galaxy: cut never-fit objects on NGMIX_N_EPOCH explicitly

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aacaca8
readers: NaN-safe mask cut, star-catalogue provenance and count check

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dc6eef8
ruff autofix (format + safe lint fixes)

github-actions[bot]
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da09791
config: cut never-fit objects in the v2 mask config too

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eab83e5
mask_v2.0: FLAGS <= 2, matching the image-sims selection

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8d2e15d
combine_results: drop unused n_campaign

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1217818
grammar: ShapePipe v1->v2 column-grammar adapter, wired into rho/tau

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1ea6ef5
cat_config: psf/shear columns match their files; guard it on candide

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0863142
rho_tau: build rho/tau catalogues without a scalar-bool mask

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39d9096
calibration: read v1 and v2 products through the grammar adapter

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2c6eb14
uv.lock: shear_psf_leakage develop@00e38c4 (loaded-catalogue rho/tau builders, seeded patches)

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2194a4b
grammar: v1 no-shear reconvolved-PSF size from NGMIX_Tpsf_1P

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34c497b
grammar: select rows of an HDF5-backed view in one pass; cache its dtype

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f7aea5f
catalog.group_dtype: name the tables that lack a column

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ea09ed7
masks: refuse a mask config's dat_ext list; masking keeps IMAFLAGS_ISO

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e3f2c3f
galaxy.mask_cut: a NaN mask value masks the object, as the config cuts do

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b9046e7
Comments describe the present; calibration configs' relative input_path

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ea8820f
tests: calibration path reproduces a v1.4.6.3 release window (candide, slow)

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330ac8d

Commits on Sep 29, 2026

Drop the SExtractor-only columns DR6 catalogue mode lacks

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9f86152

Commits on Sep 30, 2026

Commits on Oct 1, 2026

Merge develop into feat/v2-catalogue-readers

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cb657ad
Name mask columns MASK_{bit}_{label}

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2b56509
Retire the remaining patch-era scripts and docs

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34f9d0a
One catalogue reader; column names configurable through column_map

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82349f8
Read lazily where columns are not named; column_map fixes

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b1fbf84