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ComputationalCryoEM / ASPIRE-Python Public

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Non-unique Games w/ Symmetry#1391

Draft

j-c-c wants to merge 39 commits into

developComputationalCryoEM/ASPIRE-Python:developfrom

nugComputationalCryoEM/ASPIRE-Python:nugCopy head branch name to clipboard

Conversation Commits39 (39)Checks Files changed

Draft

Non-unique Games w/ Symmetry#1391
j-c-c wants to merge 39 commits into
developfrom
nug

Commits

Commits on Jun 17, 2026

Initial integration of NUG into abinitio class.
j-c-c
committed
isort, black
j-c-c
committed
Use numeric to handle cupy/numpy. Remove duplicate function.
j-c-c
committed
tox
j-c-c
committed
build full pf
j-c-c
committed
compute_fejer_weights method. Still need to optimize (very slow)
j-c-c
committed
vectorize Wigner matrix comps. Vectorize fejer_weights comp.
j-c-c
committed
Add SO3 grid generation
j-c-c
committed
tox
j-c-c
committed
use aspire symmetry parsing
j-c-c
committed
Use aspire ZYZ rotation convention
j-c-c
committed
vectorize psd_projection, transform_block, transform_back_block
j-c-c
committed
Vectorize update_S. 2x speedup!
j-c-c
committed
vectorize print update component.
j-c-c
committed
intial add of proximal_refine
j-c-c
committed
Update base class. Fix Proximal Refinement bug. Add PR update diagnostic log.
j-c-c
committed
Add euler_est_Dm
j-c-c
committed
Use in-house polarFT and Sinogram. Add symmetry handling and logs
j-c-c
committed
cleanup
j-c-c
committed
Use saff-kuijlaars method for S2 grid
j-c-c
committed
initial test file
j-c-c
committed
clean up estimate_rotations
j-c-c
committed
Explicit dtypes. Add dtype test. Add estimate_rotations test.
j-c-c
committed
Support shifts
j-c-c
committed
test shifts
j-c-c
committed
Test Dn symmetry
j-c-c
committed
move compare_rots_sym to utils
j-c-c
committed
Add generalized g_sync
j-c-c
committed
tox
j-c-c
committed
Add g_sync test
j-c-c
committed
Use new g_sync in D2 test. Remove unused method
j-c-c
committed
remove unused imports
j-c-c
committed
remove fast_radon_transform and wemd code path
j-c-c
committed
cleanup
j-c-c
committed
Add function docstrings
j-c-c
committed
Add param descrips for init
j-c-c
committed
more params. cleanup.
j-c-c
committed
remove commented out code
j-c-c
committed
Test g_sync for clean case
j-c-c
committed

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