Schematodes

A tool for expressing permutation symmetries in sets of tuples.

Inspired by the study of input symmetry in Boolean network regulatory functions, and developed with cana integration in mind.

Installing

Schematodes is available on PyPI:

pip install schematodes

Building

We wrote schematodes in rust for python with pyO3 bindings using maturin. The recommended build steps are as follows:

1. Make sure rust is installed. See the rust website for details.
2. Install maturin: pip install maturin.
3. For testing and development, tuild using the command maturin develop in the root directory of this repository. This will build and install schematodes in your current virtualenv.
4. For distribution building, you can use maturin build --release --out dist --find-interpreter. However, this should be done automatically by GitHub when pushing to main.