All pull requests

Pull requests

• Fix events crossed back or moved onto thresholds by event assignments, using post-hoc root filtering

  #3491·dweindl opened Oct 26, 2026Member·

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• Fix events crossed back or moved onto thresholds by event assignments, using root masking

  #3490·dweindl opened Oct 26, 2026Member·

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• Don't ship vendored SUNDIALS/SuiteSparse sources in wheels

  #3489·FFroehlich opened Oct 25, 2026Member·

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• Add workflow building and testing binary wheels

  #3488·FFroehlich opened Oct 25, 2026Member·

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• Pickle solvers via a settings dict instead of HDF5

  #3486·FFroehlich opened Oct 25, 2026Member·

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• Fix ExpData.x0 remaining set in the model after simulation

  #3483·dweindl opened Oct 25, 2026Member·

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• Fix splines with fixed parameters across simulation periods

  #3482·dweindl opened Oct 25, 2026Member·

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• Fix initial events lost after a failed Newton attempt

  #3481·dweindl opened Oct 25, 2026Member·

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• Fix sensitivities for switches flipped by event assignments

  #3480·dweindl opened Oct 25, 2026Member·

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• Fix heap corruption in the IDAS root function callback

  #3479·dweindl opened Oct 25, 2026Member·

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• Fix segfault for DAEs with forward sensitivities and Newton-based post-equilibration

  #3470·dweindl opened Oct 24, 2026Member·

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• Fix crashes for event outputs with post-equilibration or presimulation

  #3469·dweindl opened Oct 24, 2026Member·

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• Fix ExpData(model) not reinitializing states at the start of presimulation

  #3468·dweindl opened Oct 24, 2026Member·

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• Fix results of skipped conditions in run_simulations(failfast=True)

  #3466·dweindl opened Oct 24, 2026Member·

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• Fix ExpData.t_start_preeq being ignored, deprecate Model.t0_preeq

  #3465·dweindl opened Oct 24, 2026Member·

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• Fix switches reverted and events executed spuriously after roots at stop times

  eventspiecewise
  #3447·dweindl opened Oct 23, 2026Member·

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• Fix DAE sensitivities for events reading event-changed algebraic states

  DAEevents
  #3441·dweindl opened Oct 22, 2026Member·

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• Fix Heaviside variables of roots crossed back by event assignments

  eventspiecewise
  #3439·dweindl opened Oct 22, 2026Member·

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• GHA: Run the SBML test suite for changes to the C++ sources

  ciSBML
  #3427·dweindl opened Oct 19, 2026Member·

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• Solve Min/Max-shaped event triggers for their trigger time

  eventsPEtab
  #3302·dweindl opened Sep 30, 2026Member·

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• Chain PEtab v2 experiment periods natively in the JAX simulator

  #3198·FFroehlich opened Jul 4, 2026Member·

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• Feature/add conda recipe

  #3075·kaiserls opened Nov 24, 2025·

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• Truncated normal and censored normal noise distributions

  #1925·plakrisenko opened Jan 11, 2023Member·

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