diff --git a/.github/workflows/e2e-test.yml b/.github/workflows/e2e-test.yml
index 9939bf9711..28b1fdbe6d 100644
--- a/.github/workflows/e2e-test.yml
+++ b/.github/workflows/e2e-test.yml
@@ -292,8 +292,8 @@ jobs:
           - name: bun-vite-template
             node-version: 24
             command: |
-              vp run build
-              vp run test
+              vp fmt
+              vp run validate
         exclude:
           # frm-stack uses Docker (testcontainers) which doesn't work the same way on Windows
           - os: windows-latest
diff --git a/packages/cli/package.json b/packages/cli/package.json
index d6c6e7f229..ef4164a464 100644
--- a/packages/cli/package.json
+++ b/packages/cli/package.json
@@ -325,6 +325,7 @@
     "@voidzero-dev/vite-plus-test": "workspace:*",
     "cac": "catalog:",
     "cross-spawn": "catalog:",
+    "jsonc-parser": "catalog:",
     "oxfmt": "catalog:",
     "oxlint": "catalog:",
     "oxlint-tsgolint": "catalog:",
@@ -342,7 +343,6 @@
     "detect-indent": "catalog:",
     "detect-newline": "catalog:",
     "glob": "catalog:",
-    "jsonc-parser": "catalog:",
     "lint-staged": "catalog:",
     "minimatch": "catalog:",
     "mri": "catalog:",
diff --git a/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/package.json b/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/package.json
new file mode 100644
index 0000000000..4f2f2293c1
--- /dev/null
+++ b/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/package.json
@@ -0,0 +1,5 @@
+{
+  "devDependencies": {
+    "vite": "latest"
+  }
+}
diff --git a/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/snap.txt b/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/snap.txt
new file mode 100644
index 0000000000..f1a747174e
--- /dev/null
+++ b/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/snap.txt
@@ -0,0 +1,46 @@
+> vp migrate --no-interactive # should remove esModuleInterop: false from tsconfig.json
+VITE+ - The Unified Toolchain for the Web
+
+◇ Migrated . to Vite+<repeat>
+• Node <semver>  pnpm <semver>
+• 3 config updates applied
+! Warnings:
+  - Removed `"esModuleInterop": false` from tsconfig.json — this option has been deprecated. See https://github.com/oxc-project/tsgolint/issues/351, https://github.com/microsoft/TypeScript/issues/62529
+
+> cat tsconfig.json # verify esModuleInterop: false is removed
+{
+  "compilerOptions": {
+    "target": "ES2023",
+    "module": "ESNext",
+    "allowSyntheticDefaultImports": true,
+    "strict": true
+  }
+}
+
+> cat vite.config.ts # check vite.config.ts
+import { defineConfig } from 'vite-plus';
+
+export default defineConfig({
+  staged: {
+    "*": "vp check --fix"
+  },
+  lint: {"options":{"typeAware":true,"typeCheck":true}},
+});
+
+> cat package.json # check package.json
+{
+  "devDependencies": {
+    "vite": "npm:@voidzero-dev/vite-plus-core@latest",
+    "vite-plus": "latest"
+  },
+  "pnpm": {
+    "overrides": {
+      "vite": "npm:@voidzero-dev/vite-plus-core@latest",
+      "vitest": "npm:@voidzero-dev/vite-plus-test@latest"
+    }
+  },
+  "packageManager": "pnpm@<semver>",
+  "scripts": {
+    "prepare": "vp config"
+  }
+}
diff --git a/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/steps.json b/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/steps.json
new file mode 100644
index 0000000000..678c97eac6
--- /dev/null
+++ b/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/steps.json
@@ -0,0 +1,8 @@
+{
+  "commands": [
+    "vp migrate --no-interactive # should remove esModuleInterop: false from tsconfig.json",
+    "cat tsconfig.json # verify esModuleInterop: false is removed",
+    "cat vite.config.ts # check vite.config.ts",
+    "cat package.json # check package.json"
+  ]
+}
diff --git a/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/tsconfig.json b/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/tsconfig.json
new file mode 100644
index 0000000000..ad5b7a1f68
--- /dev/null
+++ b/packages/cli/snap-tests-global/migration-tsconfig-esmoduleinterop/tsconfig.json
@@ -0,0 +1,9 @@
+{
+  "compilerOptions": {
+    "target": "ES2023",
+    "module": "ESNext",
+    "esModuleInterop": false,
+    "allowSyntheticDefaultImports": true,
+    "strict": true
+  }
+}
diff --git a/packages/cli/src/migration/migrator.ts b/packages/cli/src/migration/migrator.ts
index d3b56c7597..f6da63af49 100644
--- a/packages/cli/src/migration/migrator.ts
+++ b/packages/cli/src/migration/migrator.ts
@@ -28,7 +28,11 @@ import { editJsonFile, isJsonFile, readJsonFile } from '../utils/json.js';
 import { detectPackageMetadata } from '../utils/package.js';
 import { displayRelative, rulesDir } from '../utils/path.js';
 import { getSpinner } from '../utils/prompts.js';
-import { hasBaseUrlInTsconfig } from '../utils/tsconfig.js';
+import {
+  findTsconfigFiles,
+  hasBaseUrlInTsconfig,
+  removeEsModuleInteropFalseFromFile,
+} from '../utils/tsconfig.js';
 import { editYamlFile, scalarString, type YamlDocument } from '../utils/yaml.js';
 import {
   PRETTIER_CONFIG_FILES,
@@ -643,6 +647,28 @@ function rewritePrettierLintStagedConfigFiles(projectPath: string, report?: Migr
   rewriteToolLintStagedConfigFiles(projectPath, rewritePrettier, 'prettier', report);
 }
 
+function cleanupDeprecatedTsconfigOptions(
+  projectPath: string,
+  silent = false,
+  report?: MigrationReport,
+): void {
+  const files = findTsconfigFiles(projectPath);
+  for (const filePath of files) {
+    if (removeEsModuleInteropFalseFromFile(filePath)) {
+      if (report) {
+        report.removedConfigCount++;
+      }
+      if (!silent) {
+        prompts.log.success(`✔ Removed esModuleInterop: false from ${displayRelative(filePath)}`);
+      }
+      warnMigration(
+        `Removed \`"esModuleInterop": false\` from ${displayRelative(filePath)} — this option has been deprecated. See https://github.com/oxc-project/tsgolint/issues/351, https://github.com/microsoft/TypeScript/issues/62529`,
+        report,
+      );
+    }
+  }
+}
+
 /**
  * Rewrite standalone project to add vite-plus dependencies
  * @param projectPath - The path to the project
@@ -724,6 +750,7 @@ export function rewriteStandaloneProject(
   if (!skipStagedMigration) {
     rewriteLintStagedConfigFile(projectPath, report);
   }
+  cleanupDeprecatedTsconfigOptions(projectPath, silent, report);
   mergeViteConfigFiles(projectPath, silent, report);
   injectLintTypeCheckDefaults(projectPath, silent, report);
   injectFmtDefaults(projectPath, silent, report);
@@ -772,6 +799,7 @@ export function rewriteMonorepo(
   if (!skipStagedMigration) {
     rewriteLintStagedConfigFile(workspaceInfo.rootDir, report);
   }
+  cleanupDeprecatedTsconfigOptions(workspaceInfo.rootDir, silent, report);
   mergeViteConfigFiles(workspaceInfo.rootDir, silent, report);
   injectLintTypeCheckDefaults(workspaceInfo.rootDir, silent, report);
   injectFmtDefaults(workspaceInfo.rootDir, silent, report);
@@ -793,6 +821,7 @@ export function rewriteMonorepoProject(
   silent = false,
   report?: MigrationReport,
 ): void {
+  cleanupDeprecatedTsconfigOptions(projectPath, silent, report);
   mergeViteConfigFiles(projectPath, silent, report);
   mergeTsdownConfigFile(projectPath, silent, report);
 
diff --git a/packages/cli/src/utils/__tests__/tsconfig.spec.ts b/packages/cli/src/utils/__tests__/tsconfig.spec.ts
new file mode 100644
index 0000000000..743dcb276c
--- /dev/null
+++ b/packages/cli/src/utils/__tests__/tsconfig.spec.ts
@@ -0,0 +1,205 @@
+import fs from 'node:fs';
+import os from 'node:os';
+import path from 'node:path';
+
+import { afterEach, beforeEach, describe, expect, it } from 'vitest';
+
+import { findTsconfigFiles, removeEsModuleInteropFalseFromFile } from '../tsconfig.js';
+
+describe('findTsconfigFiles', () => {
+  let tmpDir: string;
+
+  beforeEach(() => {
+    tmpDir = fs.mkdtempSync(path.join(os.tmpdir(), 'tsconfig-test-'));
+  });
+
+  afterEach(() => {
+    fs.rmSync(tmpDir, { recursive: true, force: true });
+  });
+
+  it('finds all tsconfig variants', () => {
+    fs.writeFileSync(path.join(tmpDir, 'tsconfig.json'), '{}');
+    fs.writeFileSync(path.join(tmpDir, 'tsconfig.app.json'), '{}');
+    fs.writeFileSync(path.join(tmpDir, 'tsconfig.node.json'), '{}');
+    fs.writeFileSync(path.join(tmpDir, 'tsconfig.build.json'), '{}');
+    fs.writeFileSync(path.join(tmpDir, 'other.json'), '{}');
+    fs.writeFileSync(path.join(tmpDir, 'package.json'), '{}');
+
+    const files = findTsconfigFiles(tmpDir);
+    const expected = [
+      path.join(tmpDir, 'tsconfig.app.json'),
+      path.join(tmpDir, 'tsconfig.build.json'),
+      path.join(tmpDir, 'tsconfig.json'),
+      path.join(tmpDir, 'tsconfig.node.json'),
+    ];
+    expect(new Set(files)).toEqual(new Set(expected));
+    expect(files).toHaveLength(4);
+  });
+
+  it('returns empty array for non-existent directory', () => {
+    expect(findTsconfigFiles('/non-existent-dir-12345')).toEqual([]);
+  });
+
+  it('returns empty array when no tsconfig files exist', () => {
+    fs.writeFileSync(path.join(tmpDir, 'package.json'), '{}');
+    expect(findTsconfigFiles(tmpDir)).toEqual([]);
+  });
+});
+
+describe('removeEsModuleInteropFalseFromFile', () => {
+  let tmpDir: string;
+
+  beforeEach(() => {
+    tmpDir = fs.mkdtempSync(path.join(os.tmpdir(), 'tsconfig-test-'));
+  });
+
+  afterEach(() => {
+    fs.rmSync(tmpDir, { recursive: true, force: true });
+  });
+
+  function writeAndRemove(filePath: string, content: string): string {
+    fs.writeFileSync(filePath, content);
+    const result = removeEsModuleInteropFalseFromFile(filePath);
+    expect(result).toBe(true);
+    return fs.readFileSync(filePath, 'utf-8');
+  }
+
+  it('removes esModuleInterop: false (middle property)', () => {
+    const filePath = path.join(tmpDir, 'tsconfig.json');
+    expect(
+      writeAndRemove(
+        filePath,
+        `{
+  "compilerOptions": {
+    "target": "ES2023",
+    "esModuleInterop": false,
+    "strict": true
+  }
+}`,
+      ),
+    ).toMatchInlineSnapshot(`
+      "{
+        "compilerOptions": {
+          "target": "ES2023",
+          "strict": true
+        }
+      }"
+    `);
+  });
+
+  it('preserves comments in JSONC', () => {
+    const filePath = path.join(tmpDir, 'tsconfig.json');
+    expect(
+      writeAndRemove(
+        filePath,
+        `{
+  // This is a comment
+  "compilerOptions": {
+    "target": "ES2023",
+    "esModuleInterop": false,
+    /* block comment */
+    "strict": true
+  }
+}`,
+      ),
+    ).toMatchInlineSnapshot(`
+      "{
+        // This is a comment
+        "compilerOptions": {
+          "target": "ES2023",
+          /* block comment */
+          "strict": true
+        }
+      }"
+    `);
+  });
+
+  it('handles esModuleInterop: false as last property', () => {
+    const filePath = path.join(tmpDir, 'tsconfig.json');
+    expect(
+      writeAndRemove(
+        filePath,
+        `{
+  "compilerOptions": {
+    "target": "ES2023",
+    "esModuleInterop": false
+  }
+}`,
+      ),
+    ).toMatchInlineSnapshot(`
+      "{
+        "compilerOptions": {
+          "target": "ES2023"
+        }
+      }"
+    `);
+  });
+
+  it('handles inline block comment next to esModuleInterop: false', () => {
+    const filePath = path.join(tmpDir, 'tsconfig.json');
+    expect(
+      writeAndRemove(
+        filePath,
+        `{
+  "compilerOptions": {
+    "target": "ES2023",
+    "esModuleInterop": false /* reason */,
+    "strict": true
+  }
+}`,
+      ),
+    ).toMatchInlineSnapshot(`
+      "{
+        "compilerOptions": {
+          "target": "ES2023" /* reason */,
+          "strict": true
+        }
+      }"
+    `);
+  });
+
+  it('handles compact single-line JSON', () => {
+    const filePath = path.join(tmpDir, 'tsconfig.json');
+    expect(
+      writeAndRemove(filePath, '{"compilerOptions":{"esModuleInterop": false, "strict": true}}'),
+    ).toMatchInlineSnapshot(`"{"compilerOptions":{"strict": true}}"`);
+  });
+
+  it('handles compact single-line JSONC with spaces', () => {
+    const filePath = path.join(tmpDir, 'tsconfig.json');
+    expect(
+      writeAndRemove(
+        filePath,
+        '{ "compilerOptions": { "esModuleInterop": false, "strict": true } }',
+      ),
+    ).toMatchInlineSnapshot(`"{ "compilerOptions": {"strict": true } }"`);
+  });
+
+  it('leaves esModuleInterop: true untouched', () => {
+    const filePath = path.join(tmpDir, 'tsconfig.json');
+    const original = JSON.stringify({ compilerOptions: { esModuleInterop: true } }, null, 2);
+    fs.writeFileSync(filePath, original);
+
+    const result = removeEsModuleInteropFalseFromFile(filePath);
+    expect(result).toBe(false);
+    expect(fs.readFileSync(filePath, 'utf-8')).toBe(original);
+  });
+
+  it('returns false for non-existent file', () => {
+    expect(removeEsModuleInteropFalseFromFile('/non-existent-file.json')).toBe(false);
+  });
+
+  it('returns false when no compilerOptions', () => {
+    const filePath = path.join(tmpDir, 'tsconfig.json');
+    fs.writeFileSync(filePath, '{}');
+
+    expect(removeEsModuleInteropFalseFromFile(filePath)).toBe(false);
+  });
+
+  it('returns false when esModuleInterop is not present', () => {
+    const filePath = path.join(tmpDir, 'tsconfig.json');
+    fs.writeFileSync(filePath, JSON.stringify({ compilerOptions: { strict: true } }, null, 2));
+
+    expect(removeEsModuleInteropFalseFromFile(filePath)).toBe(false);
+  });
+});
diff --git a/packages/cli/src/utils/tsconfig.ts b/packages/cli/src/utils/tsconfig.ts
index f540b8ad97..8d26868be9 100644
--- a/packages/cli/src/utils/tsconfig.ts
+++ b/packages/cli/src/utils/tsconfig.ts
@@ -1,6 +1,8 @@
 import fs from 'node:fs';
 import path from 'node:path';
 
+import { applyEdits, modify, parse as parseJsonc } from 'jsonc-parser';
+
 /**
  * Check if tsconfig.json has compilerOptions.baseUrl set.
  * oxlint's TypeScript checker (tsgolint) does not support baseUrl,
@@ -16,3 +18,45 @@ export function hasBaseUrlInTsconfig(projectPath: string): boolean {
     return false;
   }
 }
+
+const TSCONFIG_FILE_RE = /^tsconfig(\.[\w-]+)?\.json$/i;
+
+export function findTsconfigFiles(projectPath: string): string[] {
+  try {
+    const entries = fs.readdirSync(projectPath);
+    return entries
+      .filter((name) => TSCONFIG_FILE_RE.test(name))
+      .map((name) => path.join(projectPath, name));
+  } catch {
+    return [];
+  }
+}
+
+// jsonc-parser is in dependencies (not devDependencies) so it's available at
+// runtime for tsc-compiled code (init-config.ts imports this file).
+// TODO: move back to devDependencies once the bundle refactoring lands
+// https://github.com/voidzero-dev/vite-plus/issues/744
+export function removeEsModuleInteropFalseFromFile(filePath: string): boolean {
+  let text: string;
+  try {
+    text = fs.readFileSync(filePath, 'utf-8');
+  } catch {
+    return false;
+  }
+
+  const parsed = parseJsonc(text) as {
+    compilerOptions?: { esModuleInterop?: boolean };
+  } | null;
+  if (parsed?.compilerOptions?.esModuleInterop !== false) {
+    return false;
+  }
+
+  const edits = modify(text, ['compilerOptions', 'esModuleInterop'], undefined, {});
+  if (edits.length === 0) {
+    return false;
+  }
+
+  const newText = applyEdits(text, edits);
+  fs.writeFileSync(filePath, newText);
+  return true;
+}
diff --git a/pnpm-lock.yaml b/pnpm-lock.yaml
index 35d2e84d98..6f30c695f8 100644
--- a/pnpm-lock.yaml
+++ b/pnpm-lock.yaml
@@ -343,6 +343,9 @@ importers:
       cross-spawn:
         specifier: 'catalog:'
         version: 7.0.6
+      jsonc-parser:
+        specifier: 'catalog:'
+        version: 3.3.1
       oxfmt:
         specifier: 'catalog:'
         version: 0.42.0
@@ -389,9 +392,6 @@ importers:
       glob:
         specifier: 'catalog:'
         version: 13.0.0
-      jsonc-parser:
-        specifier: 'catalog:'
-        version: 3.3.1
       lint-staged:
         specifier: 'catalog:'
         version: 16.4.0
diff --git a/rfcs/migration-command.md b/rfcs/migration-command.md
index 64d86fe6fc..f4d9e71dab 100644
--- a/rfcs/migration-command.md
+++ b/rfcs/migration-command.md
@@ -38,6 +38,7 @@ When transitioning to Vite+, projects typically use standalone tools like vite,
 - ✅ **Configuration files**:
   - .oxlintrc → vite.config.ts (lint section)
   - .oxfmtrc → vite.config.ts (format section)
+- ✅ **tsconfig.json cleanup**: Removes deprecated `esModuleInterop: false` (causes oxlint tsgolint errors)
 
 **What this command optionally migrates** (prompted):
 
@@ -52,7 +53,6 @@ When transitioning to Vite+, projects typically use standalone tools like vite,
 **What this command does NOT migrate**:
 
 - ❌ Package.json scripts → vite-task.json (different feature)
-- ❌ TypeScript configuration changes
 - ❌ Build tool changes (webpack/rollup → vite)
 
 These are **consolidation migrations**, not **feature migrations**.
@@ -605,6 +605,21 @@ When a Prettier configuration file (`.prettierrc*`, `prettier.config.*`, or `"pr
 - Failure is non-blocking — warns and continues with the rest of migration
 - Re-runnable: if user declines initially, running `vp migrate` again offers prettier migration
 
+## tsconfig.json Cleanup
+
+During migration, `vp migrate` scans all `tsconfig*.json` files in the project directory (non-recursive) and removes deprecated options that would cause lint errors.
+
+**Currently removed options**:
+
+- `"esModuleInterop": false` — This option has been removed by typescript. When present, `vp lint --type-aware` fails with: `Option 'esModuleInterop=false' has been removed.`
+
+**Behavior**:
+
+- Only `esModuleInterop: false` is removed — `true` is left alone
+- Uses `jsonc-parser` for JSONC-aware editing that preserves comments and formatting
+- Scans all `tsconfig*.json` variants (e.g., `tsconfig.json`, `tsconfig.app.json`, `tsconfig.node.json`)
+- Runs automatically as part of the config rewrite phase — no user prompt needed
+
 ## References
 
 ### Code Transformation