diff --git a/test/e2e/tools.mjs b/test/e2e/tools.mjs
index c8fd969bbcdc..2835e9c280ec 100644
--- a/test/e2e/tools.mjs
+++ b/test/e2e/tools.mjs
@@ -71,7 +71,10 @@ export function getActorTestDir(url) {
 export async function pushActor(client, dirName) {
     await copyPackages(dirName);
     try {
-        execSync('npx -y apify-cli@beta push', { cwd: dirName });
+        execSync('npx -y apify-cli@beta push', {
+            cwd: dirName,
+            env: { ...process.env, GIT_CEILING_DIRECTORIES: dirname(dirName) },
+        });
     } catch (err) {
         console.error(colors.red(`Failed to push actor to the Apify platform. (signal ${colors.yellow(err.signal)})`));
 
diff --git a/yarn.lock b/yarn.lock
index 564345fe6651..a1e11b37021d 100644
--- a/yarn.lock
+++ b/yarn.lock
@@ -1582,7 +1582,7 @@ __metadata:
   languageName: node
   linkType: hard
 
-"@hono/node-server@npm:^1.19.7":
+"@hono/node-server@npm:^1.19.9":
   version: 1.19.10
   resolution: "@hono/node-server@npm:1.19.10"
   peerDependencies:
@@ -1876,22 +1876,6 @@ __metadata:
   languageName: node
   linkType: hard
 
-"@isaacs/balanced-match@npm:^4.0.1":
-  version: 4.0.1
-  resolution: "@isaacs/balanced-match@npm:4.0.1"
-  checksum: 10c0/7da011805b259ec5c955f01cee903da72ad97c5e6f01ca96197267d3f33103d5b2f8a1af192140f3aa64526c593c8d098ae366c2b11f7f17645d12387c2fd420
-  languageName: node
-  linkType: hard
-
-"@isaacs/brace-expansion@npm:^5.0.0":
-  version: 5.0.0
-  resolution: "@isaacs/brace-expansion@npm:5.0.0"
-  dependencies:
-    "@isaacs/balanced-match": "npm:^4.0.1"
-  checksum: 10c0/b4d4812f4be53afc2c5b6c545001ff7a4659af68d4484804e9d514e183d20269bb81def8682c01a22b17c4d6aed14292c8494f7d2ac664e547101c1a905aa977
-  languageName: node
-  linkType: hard
-
 "@isaacs/cliui@npm:^8.0.2":
   version: 8.0.2
   resolution: "@isaacs/cliui@npm:8.0.2"
@@ -2093,10 +2077,10 @@ __metadata:
   linkType: hard
 
 "@modelcontextprotocol/sdk@npm:^1.17.2":
-  version: 1.25.2
-  resolution: "@modelcontextprotocol/sdk@npm:1.25.2"
+  version: 1.27.1
+  resolution: "@modelcontextprotocol/sdk@npm:1.27.1"
   dependencies:
-    "@hono/node-server": "npm:^1.19.7"
+    "@hono/node-server": "npm:^1.19.9"
     ajv: "npm:^8.17.1"
     ajv-formats: "npm:^3.0.1"
     content-type: "npm:^1.0.5"
@@ -2104,14 +2088,15 @@ __metadata:
     cross-spawn: "npm:^7.0.5"
     eventsource: "npm:^3.0.2"
     eventsource-parser: "npm:^3.0.0"
-    express: "npm:^5.0.1"
-    express-rate-limit: "npm:^7.5.0"
-    jose: "npm:^6.1.1"
+    express: "npm:^5.2.1"
+    express-rate-limit: "npm:^8.2.1"
+    hono: "npm:^4.11.4"
+    jose: "npm:^6.1.3"
     json-schema-typed: "npm:^8.0.2"
     pkce-challenge: "npm:^5.0.0"
     raw-body: "npm:^3.0.0"
     zod: "npm:^3.25 || ^4.0"
-    zod-to-json-schema: "npm:^3.25.0"
+    zod-to-json-schema: "npm:^3.25.1"
   peerDependencies:
     "@cfworker/json-schema": ^4.1.1
     zod: ^3.25 || ^4.0
@@ -2120,7 +2105,7 @@ __metadata:
       optional: true
     zod:
       optional: false
-  checksum: 10c0/ffc024398e1b7841fb1ff2dc540e2e84f4b97a2a4058ef48e58836ce6077321c536a3858e9155472b7933c4773975b375167815bd4d721c3ca1e92db62e9488c
+  checksum: 10c0/1b8ad87093c9e43174c7d65864b3d826a8dd050d5c32248f5da49fd72c51b556ebd702e3e49a7f1cc7fa25717a3f7fcee22ed89edd5bd3d8f4e1f8ca499b365e
   languageName: node
   linkType: hard
 
@@ -4727,7 +4712,7 @@ __metadata:
   languageName: node
   linkType: hard
 
-"brace-expansion@npm:^2.0.1":
+"brace-expansion@npm:^2.0.1, brace-expansion@npm:^2.0.2":
   version: 2.0.2
   resolution: "brace-expansion@npm:2.0.2"
   dependencies:
@@ -6976,12 +6961,14 @@ __metadata:
   languageName: node
   linkType: hard
 
-"express-rate-limit@npm:^7.5.0":
-  version: 7.5.1
-  resolution: "express-rate-limit@npm:7.5.1"
+"express-rate-limit@npm:^8.2.1":
+  version: 8.2.1
+  resolution: "express-rate-limit@npm:8.2.1"
+  dependencies:
+    ip-address: "npm:10.0.1"
   peerDependencies:
     express: ">= 4.11"
-  checksum: 10c0/b07de84d700a2c07c4bf2f040e7558ed5a1f660f03ed5f30bf8ff7b51e98ba7a85215640e70fc48cbbb9151066ea51239d9a1b41febc9b84d98c7915b0186161
+  checksum: 10c0/54185f211c25655382436b8ad1a2136df0d5dc88f4d9d4438ca7cbc87cef0cd34cb01b8fc62d290445326aa6581470d2ff44502c3f1a34a5ed2c2ce56809fa01
   languageName: node
   linkType: hard
 
@@ -7024,7 +7011,7 @@ __metadata:
   languageName: node
   linkType: hard
 
-"express@npm:^5.0.1":
+"express@npm:^5.2.1":
   version: 5.2.1
   resolution: "express@npm:5.2.1"
   dependencies:
@@ -8243,6 +8230,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"hono@npm:^4.11.4":
+  version: 4.12.4
+  resolution: "hono@npm:4.12.4"
+  checksum: 10c0/e43220730ca2ae0eb270a799ec3a8a05273787e6d6d7b2134d9703e318af38bb327c46b0fa52757dbb099060d15642808372851f0306e5683874f0b05dbf7fe4
+  languageName: node
+  linkType: hard
+
 "hosted-git-info@npm:^2.1.4":
   version: 2.8.9
   resolution: "hosted-git-info@npm:2.8.9"
@@ -8756,6 +8750,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"ip-address@npm:10.0.1":
+  version: 10.0.1
+  resolution: "ip-address@npm:10.0.1"
+  checksum: 10c0/1634d79dae18394004775cb6d699dc46b7c23df6d2083164025a2b15240c1164fccde53d0e08bd5ee4fc53913d033ab6b5e395a809ad4b956a940c446e948843
+  languageName: node
+  linkType: hard
+
 "ip-address@npm:^10.0.1":
   version: 10.1.0
   resolution: "ip-address@npm:10.1.0"
@@ -9321,7 +9322,7 @@ __metadata:
   languageName: node
   linkType: hard
 
-"jose@npm:^6.1.1":
+"jose@npm:^6.1.3":
   version: 6.1.3
   resolution: "jose@npm:6.1.3"
   checksum: 10c0/b9577b4a7a5e84131011c23823db9f5951eae3ba796771a6a2401ae5dd50daf71104febc8ded9c38146aa5ebe94a92ac09c725e699e613ef26949b9f5a8bc30f
@@ -10374,57 +10375,48 @@ __metadata:
   languageName: node
   linkType: hard
 
-"minimatch@npm:^10.0.3":
-  version: 10.1.1
-  resolution: "minimatch@npm:10.1.1"
-  dependencies:
-    "@isaacs/brace-expansion": "npm:^5.0.0"
-  checksum: 10c0/c85d44821c71973d636091fddbfbffe62370f5ee3caf0241c5b60c18cd289e916200acb2361b7e987558cd06896d153e25d505db9fc1e43e6b4b6752e2702902
-  languageName: node
-  linkType: hard
-
-"minimatch@npm:^10.2.1":
-  version: 10.2.1
-  resolution: "minimatch@npm:10.2.1"
+"minimatch@npm:^10.0.3, minimatch@npm:^10.2.1":
+  version: 10.2.4
+  resolution: "minimatch@npm:10.2.4"
   dependencies:
     brace-expansion: "npm:^5.0.2"
-  checksum: 10c0/86c3ed013630e820fda00336ee786a03098723b60bfae452de6306708fc83619df40a99dc6ec59c97d14e25b3b3371669a04e5bf508b1b00339b20229c4907d2
+  checksum: 10c0/35f3dfb7b99b51efd46afd378486889f590e7efb10e0f6a10ba6800428cf65c9a8dedb74427d0570b318d749b543dc4e85f06d46d2858bc8cac7e1eb49a95945
   languageName: node
   linkType: hard
 
 "minimatch@npm:^3.0.4, minimatch@npm:^3.1.2":
-  version: 3.1.2
-  resolution: "minimatch@npm:3.1.2"
+  version: 3.1.5
+  resolution: "minimatch@npm:3.1.5"
   dependencies:
     brace-expansion: "npm:^1.1.7"
-  checksum: 10c0/0262810a8fc2e72cca45d6fd86bd349eee435eb95ac6aa45c9ea2180e7ee875ef44c32b55b5973ceabe95ea12682f6e3725cbb63d7a2d1da3ae1163c8b210311
+  checksum: 10c0/2ecbdc0d33f07bddb0315a8b5afbcb761307a8778b48f0b312418ccbced99f104a2d17d8aca7573433c70e8ccd1c56823a441897a45e384ea76ef401a26ace70
   languageName: node
   linkType: hard
 
 "minimatch@npm:^5.0.1":
-  version: 5.1.6
-  resolution: "minimatch@npm:5.1.6"
+  version: 5.1.9
+  resolution: "minimatch@npm:5.1.9"
   dependencies:
     brace-expansion: "npm:^2.0.1"
-  checksum: 10c0/3defdfd230914f22a8da203747c42ee3c405c39d4d37ffda284dac5e45b7e1f6c49aa8be606509002898e73091ff2a3bbfc59c2c6c71d4660609f63aa92f98e3
+  checksum: 10c0/4202718683815a7288b13e470160a4f9560cf392adef4f453927505817e01ef6b3476ecde13cfcaed17e7326dd3b69ad44eb2daeb19a217c5500f9277893f1d6
   languageName: node
   linkType: hard
 
 "minimatch@npm:^8.0.2":
-  version: 8.0.4
-  resolution: "minimatch@npm:8.0.4"
+  version: 8.0.7
+  resolution: "minimatch@npm:8.0.7"
   dependencies:
     brace-expansion: "npm:^2.0.1"
-  checksum: 10c0/a0a394c356dd5b4cb7f821720841a82fa6f07c9c562c5b716909d1b6ec5e56a7e4c4b5029da26dd256b7d2b3a3f38cbf9ddd8680e887b9b5282b09c05501c1ca
+  checksum: 10c0/46d9dee24174f8a9eadec97ba36cba2e63f1fff8b36324e1825229bd9307ffee7ffd2f5a2749b29ba796eda877cd9c1687f9d1b399a10b290346561f2a8145f8
   languageName: node
   linkType: hard
 
 "minimatch@npm:^9.0.0, minimatch@npm:^9.0.4, minimatch@npm:^9.0.5":
-  version: 9.0.5
-  resolution: "minimatch@npm:9.0.5"
+  version: 9.0.9
+  resolution: "minimatch@npm:9.0.9"
   dependencies:
-    brace-expansion: "npm:^2.0.1"
-  checksum: 10c0/de96cf5e35bdf0eab3e2c853522f98ffbe9a36c37797778d2665231ec1f20a9447a7e567cb640901f89e4daaa95ae5d70c65a9e8aa2bb0019b6facbc3c0575ed
+    brace-expansion: "npm:^2.0.2"
+  checksum: 10c0/0b6a58530dbb00361745aa6c8cffaba4c90f551afe7c734830bd95fd88ebf469dd7355a027824ea1d09e37181cfeb0a797fb17df60c15ac174303ac110eb7e86
   languageName: node
   linkType: hard
 
@@ -15354,7 +15346,7 @@ __metadata:
   languageName: node
   linkType: hard
 
-"zod-to-json-schema@npm:^3.22.3, zod-to-json-schema@npm:^3.25.0":
+"zod-to-json-schema@npm:^3.22.3, zod-to-json-schema@npm:^3.25.0, zod-to-json-schema@npm:^3.25.1":
   version: 3.25.1
   resolution: "zod-to-json-schema@npm:3.25.1"
   peerDependencies: