From 06e05b6faacae613ec8f8287792b4c2bbb3cb709 Mon Sep 17 00:00:00 2001 From: github-actions Date: Mon, 9 Feb 2026 22:52:51 +0000 Subject: [PATCH] auto dependency upgrades --- .../requirements-ubuntu-latest_py3.11.txt | 22 +++-- ...quirements-ubuntu-latest_py3.11_extras.txt | 85 +++++++++---------- .../requirements-ubuntu-latest_py3.12.txt | 22 +++-- ...quirements-ubuntu-latest_py3.12_extras.txt | 84 ++++++++---------- 4 files changed, 105 insertions(+), 108 deletions(-) diff --git a/requirements/requirements-ubuntu-latest_py3.11.txt b/requirements/requirements-ubuntu-latest_py3.11.txt index e073fa3c..2769b72b 100644 --- a/requirements/requirements-ubuntu-latest_py3.11.txt +++ b/requirements/requirements-ubuntu-latest_py3.11.txt @@ -6,13 +6,15 @@ # annotated-types==0.7.0 # via pydantic +arro3-core==0.6.5 + # via deltalake bibtexparser==1.4.4 # via pymatgen blake3==1.0.8 # via emmet-core -boto3==1.42.38 +boto3==1.42.45 # via mp-api (pyproject.toml) -botocore==1.42.38 +botocore==1.42.45 # via # boto3 # s3transfer @@ -24,6 +26,10 @@ contourpy==1.3.3 # via matplotlib cycler==0.12.1 # via matplotlib +deltalake==1.4.2 + # via mp-api (pyproject.toml) +deprecated==1.3.1 + # via deltalake emmet-core==0.86.3 # via mp-api (pyproject.toml) fonttools==4.61.1 @@ -49,11 +55,11 @@ monty==2025.3.3 # pymatgen mpmath==1.3.0 # via sympy -narwhals==2.15.0 +narwhals==2.16.0 # via plotly networkx==3.6.1 # via pymatgen -numpy==2.4.1 +numpy==2.4.2 # via # contourpy # matplotlib @@ -63,7 +69,7 @@ numpy==2.4.1 # pymatgen-io-validation # scipy # spglib -orjson==3.11.6 +orjson==3.11.7 # via # mp-api (pyproject.toml) # pymatgen @@ -79,7 +85,7 @@ pillow==12.1.0 # via matplotlib plotly==6.5.2 # via pymatgen -pyarrow==22.0.0 +pyarrow==23.0.0 # via mp-api (pyproject.toml) pybtex==0.25.1 # via emmet-core @@ -135,7 +141,7 @@ sympy==1.14.0 # via pymatgen tabulate==0.9.0 # via pymatgen -tqdm==4.67.1 +tqdm==4.67.3 # via pymatgen typing-extensions==4.15.0 # via @@ -157,3 +163,5 @@ urllib3==2.6.3 # via # botocore # requests +wrapt==2.1.1 + # via deprecated diff --git a/requirements/requirements-ubuntu-latest_py3.11_extras.txt b/requirements/requirements-ubuntu-latest_py3.11_extras.txt index ffc1a886..0f35bc7c 100644 --- a/requirements/requirements-ubuntu-latest_py3.11_extras.txt +++ b/requirements/requirements-ubuntu-latest_py3.11_extras.txt @@ -14,6 +14,8 @@ anyio==4.12.1 # mcp # sse-starlette # starlette +arro3-core==0.6.5 + # via deltalake arrow==1.4.0 # via isoduration ase==3.27.0 @@ -25,9 +27,9 @@ attrs==25.4.0 # cyclopts # jsonschema # referencing -authlib==1.6.6 +authlib==1.6.7 # via fastmcp -babel==2.17.0 +babel==2.18.0 # via sphinx backports-tarfile==1.2.0 # via jaraco-context @@ -41,9 +43,9 @@ blake3==1.0.8 # via emmet-core boltons==25.0.0 # via mpcontribs-client -boto3==1.42.38 +boto3==1.42.45 # via mp-api (pyproject.toml) -botocore==1.42.38 +botocore==1.42.45 # via # boto3 # s3transfer @@ -51,7 +53,7 @@ bravado==12.0.1 # via mpcontribs-client bravado-core==6.1.1 # via bravado -cachetools==6.2.6 +cachetools==7.0.0 # via # mpcontribs-client # py-key-value-aio @@ -74,8 +76,10 @@ cloudpickle==3.1.2 # via pydocket contourpy==1.3.3 # via matplotlib -coverage[toml]==7.13.2 +coverage[toml]==7.13.4 # via pytest-cov +croniter==6.0.0 + # via pydocket cryptography==46.0.4 # via # authlib @@ -89,6 +93,10 @@ cyclopts==4.5.1 # via fastmcp decorator==5.2.1 # via ipython +deltalake==1.4.2 + # via mp-api (pyproject.toml) +deprecated==1.3.1 + # via deltalake diskcache==5.6.3 # via py-key-value-aio distlib==0.4.0 @@ -116,7 +124,7 @@ executing==2.2.1 # via stack-data fakeredis[lua]==2.33.0 # via pydocket -fastmcp==2.14.4 +fastmcp==2.14.5 # via mp-api (pyproject.toml) filelock==3.20.3 # via virtualenv @@ -169,7 +177,7 @@ inflect==7.5.0 # via robocrys iniconfig==2.3.0 # via pytest -ipython==9.9.0 +ipython==9.10.0 # via mpcontribs-client ipython-pygments-lexers==1.1.1 # via ipython @@ -268,7 +276,7 @@ more-itertools==10.8.0 # jaraco-functools mp-pyrho==0.5.1 # via pymatgen-analysis-defects -mpcontribs-client==5.10.4 +mpcontribs-client==5.10.5 # via mp-api (pyproject.toml) mpmath==1.3.0 # via sympy @@ -282,7 +290,7 @@ mypy-extensions==1.1.0 # via # mp-api (pyproject.toml) # mypy -narwhals==2.15.0 +narwhals==2.16.0 # via plotly networkx==3.6.1 # via @@ -291,7 +299,7 @@ networkx==3.6.1 # scikit-image nodeenv==1.10.0 # via pre-commit -numpy==2.4.1 +numpy==2.4.2 # via # ase # contourpy @@ -317,23 +325,8 @@ numpy==2.4.1 openapi-pydantic==0.5.1 # via fastmcp opentelemetry-api==1.39.1 - # via - # opentelemetry-exporter-prometheus - # opentelemetry-instrumentation - # opentelemetry-sdk - # opentelemetry-semantic-conventions - # pydocket -opentelemetry-exporter-prometheus==0.60b1 # via pydocket -opentelemetry-instrumentation==0.60b1 - # via pydocket -opentelemetry-sdk==1.39.1 - # via opentelemetry-exporter-prometheus -opentelemetry-semantic-conventions==0.60b1 - # via - # opentelemetry-instrumentation - # opentelemetry-sdk -orjson==3.11.6 +orjson==3.11.7 # via # mp-api (pyproject.toml) # pymatgen @@ -342,7 +335,6 @@ packaging==26.0 # fastmcp # lazy-loader # matplotlib - # opentelemetry-instrumentation # plotly # pytest # scikit-image @@ -355,7 +347,7 @@ pandas==2.3.3 # mpcontribs-client # pymatgen # seaborn -parso==0.8.5 +parso==0.8.6 # via jedi pathable==0.4.4 # via jsonschema-path @@ -388,9 +380,7 @@ pluggy==1.6.0 pre-commit==4.5.1 # via mp-api (pyproject.toml) prometheus-client==0.24.1 - # via - # opentelemetry-exporter-prometheus - # pydocket + # via pydocket prompt-toolkit==3.0.52 # via ipython psutil==7.2.2 @@ -408,7 +398,9 @@ py-key-value-aio[disk,keyring,memory,redis]==0.3.0 py-key-value-shared==0.3.0 # via py-key-value-aio pyarrow==23.0.0 - # via emmet-core + # via + # emmet-core + # mp-api (pyproject.toml) pybtex==0.25.1 # via # emmet-core @@ -434,7 +426,7 @@ pydantic-settings==2.12.0 # emmet-core # mcp # pymatgen-io-validation -pydocket==0.16.6 +pydocket==0.17.5 # via fastmcp pyflakes==3.4.0 # via flake8 @@ -447,7 +439,7 @@ pygments==2.19.2 # sphinx pyisemail==2.0.1 # via mpcontribs-client -pyjwt[crypto]==2.10.1 +pyjwt[crypto]==2.11.0 # via mcp pymatgen==2025.10.7 # via @@ -500,6 +492,7 @@ python-dateutil==2.9.0.post0 # botocore # bravado # bravado-core + # croniter # matplotlib # pandas python-dotenv==1.2.1 @@ -513,6 +506,7 @@ python-multipart==0.0.22 pytz==2025.2 # via # bravado-core + # croniter # pandas pyyaml==6.0.3 # via @@ -522,7 +516,7 @@ pyyaml==6.0.3 # pre-commit # pybtex # swagger-spec-validator -redis==7.1.0 +redis==7.1.1 # via # fakeredis # py-key-value-aio @@ -551,7 +545,7 @@ rfc3986-validator==0.1.1 # via jsonschema rfc3987-syntax==1.1.0 # via jsonschema -rich==14.3.1 +rich==14.3.2 # via # cyclopts # fastmcp @@ -591,10 +585,8 @@ seaborn==0.13.2 # via pymatgen-analysis-diffusion secretstorage==3.5.0 # via keyring -seekpath==2.2.0 +seekpath==2.2.1 # via emmet-core -semantic-version==2.10.0 - # via mpcontribs-client shapely==2.1.2 # via pymatgen-analysis-alloys shellingham==1.5.4 @@ -655,7 +647,7 @@ threadpoolctl==3.6.0 # via scikit-learn tifffile==2026.1.28 # via scikit-image -tqdm==4.67.1 +tqdm==4.67.3 # via # matminer # mpcontribs-client @@ -670,11 +662,12 @@ typer==0.21.1 # via pydocket types-requests==2.32.4.20260107 # via mp-api (pyproject.toml) -types-setuptools==80.10.0.20260124 +types-setuptools==81.0.0.20260209 # via mp-api (pyproject.toml) typing-extensions==4.15.0 # via # anyio + # arro3-core # blake3 # bravado # emmet-core @@ -686,8 +679,6 @@ typing-extensions==4.15.0 # mp-api (pyproject.toml) # mypy # opentelemetry-api - # opentelemetry-sdk - # opentelemetry-semantic-conventions # pint # py-key-value-shared # pydantic @@ -727,13 +718,13 @@ uvicorn==0.40.0 # mcp virtualenv==20.36.1 # via pre-commit -wcwidth==0.5.2 +wcwidth==0.6.0 # via prompt-toolkit webcolors==25.10.0 # via jsonschema websockets==16.0 # via fastmcp -wrapt==1.17.3 - # via opentelemetry-instrumentation +wrapt==2.1.1 + # via deprecated zipp==3.23.0 # via importlib-metadata diff --git a/requirements/requirements-ubuntu-latest_py3.12.txt b/requirements/requirements-ubuntu-latest_py3.12.txt index 2466a309..6bdfdf4a 100644 --- a/requirements/requirements-ubuntu-latest_py3.12.txt +++ b/requirements/requirements-ubuntu-latest_py3.12.txt @@ -6,13 +6,15 @@ # annotated-types==0.7.0 # via pydantic +arro3-core==0.6.5 + # via deltalake bibtexparser==1.4.4 # via pymatgen blake3==1.0.8 # via emmet-core -boto3==1.42.38 +boto3==1.42.45 # via mp-api (pyproject.toml) -botocore==1.42.38 +botocore==1.42.45 # via # boto3 # s3transfer @@ -24,6 +26,10 @@ contourpy==1.3.3 # via matplotlib cycler==0.12.1 # via matplotlib +deltalake==1.4.2 + # via mp-api (pyproject.toml) +deprecated==1.3.1 + # via deltalake emmet-core==0.86.3 # via mp-api (pyproject.toml) fonttools==4.61.1 @@ -49,11 +55,11 @@ monty==2025.3.3 # pymatgen mpmath==1.3.0 # via sympy -narwhals==2.15.0 +narwhals==2.16.0 # via plotly networkx==3.6.1 # via pymatgen -numpy==2.4.1 +numpy==2.4.2 # via # contourpy # matplotlib @@ -63,7 +69,7 @@ numpy==2.4.1 # pymatgen-io-validation # scipy # spglib -orjson==3.11.6 +orjson==3.11.7 # via # mp-api (pyproject.toml) # pymatgen @@ -79,7 +85,7 @@ pillow==12.1.0 # via matplotlib plotly==6.5.2 # via pymatgen -pyarrow==22.0.0 +pyarrow==23.0.0 # via mp-api (pyproject.toml) pybtex==0.25.1 # via emmet-core @@ -135,7 +141,7 @@ sympy==1.14.0 # via pymatgen tabulate==0.9.0 # via pymatgen -tqdm==4.67.1 +tqdm==4.67.3 # via pymatgen typing-extensions==4.15.0 # via @@ -155,3 +161,5 @@ urllib3==2.6.3 # via # botocore # requests +wrapt==2.1.1 + # via deprecated diff --git a/requirements/requirements-ubuntu-latest_py3.12_extras.txt b/requirements/requirements-ubuntu-latest_py3.12_extras.txt index 6c0f7e0e..d6ae9c46 100644 --- a/requirements/requirements-ubuntu-latest_py3.12_extras.txt +++ b/requirements/requirements-ubuntu-latest_py3.12_extras.txt @@ -14,6 +14,8 @@ anyio==4.12.1 # mcp # sse-starlette # starlette +arro3-core==0.6.5 + # via deltalake arrow==1.4.0 # via isoduration ase==3.27.0 @@ -25,9 +27,9 @@ attrs==25.4.0 # cyclopts # jsonschema # referencing -authlib==1.6.6 +authlib==1.6.7 # via fastmcp -babel==2.17.0 +babel==2.18.0 # via sphinx beartype==0.22.9 # via @@ -39,9 +41,9 @@ blake3==1.0.8 # via emmet-core boltons==25.0.0 # via mpcontribs-client -boto3==1.42.38 +boto3==1.42.45 # via mp-api (pyproject.toml) -botocore==1.42.38 +botocore==1.42.45 # via # boto3 # s3transfer @@ -49,7 +51,7 @@ bravado==12.0.1 # via mpcontribs-client bravado-core==6.1.1 # via bravado -cachetools==6.2.6 +cachetools==7.0.0 # via # mpcontribs-client # py-key-value-aio @@ -72,8 +74,10 @@ cloudpickle==3.1.2 # via pydocket contourpy==1.3.3 # via matplotlib -coverage[toml]==7.13.2 +coverage[toml]==7.13.4 # via pytest-cov +croniter==6.0.0 + # via pydocket cryptography==46.0.4 # via # authlib @@ -87,6 +91,10 @@ cyclopts==4.5.1 # via fastmcp decorator==5.2.1 # via ipython +deltalake==1.4.2 + # via mp-api (pyproject.toml) +deprecated==1.3.1 + # via deltalake diskcache==5.6.3 # via py-key-value-aio distlib==0.4.0 @@ -114,7 +122,7 @@ executing==2.2.1 # via stack-data fakeredis[lua]==2.33.0 # via pydocket -fastmcp==2.14.4 +fastmcp==2.14.5 # via mp-api (pyproject.toml) filelock==3.20.3 # via virtualenv @@ -165,7 +173,7 @@ inflect==7.5.0 # via robocrys iniconfig==2.3.0 # via pytest -ipython==9.9.0 +ipython==9.10.0 # via mpcontribs-client ipython-pygments-lexers==1.1.1 # via ipython @@ -264,7 +272,7 @@ more-itertools==10.8.0 # jaraco-functools mp-pyrho==0.5.1 # via pymatgen-analysis-defects -mpcontribs-client==5.10.4 +mpcontribs-client==5.10.5 # via mp-api (pyproject.toml) mpmath==1.3.0 # via sympy @@ -278,7 +286,7 @@ mypy-extensions==1.1.0 # via # mp-api (pyproject.toml) # mypy -narwhals==2.15.0 +narwhals==2.16.0 # via plotly networkx==3.6.1 # via @@ -287,7 +295,7 @@ networkx==3.6.1 # scikit-image nodeenv==1.10.0 # via pre-commit -numpy==2.4.1 +numpy==2.4.2 # via # ase # contourpy @@ -313,23 +321,8 @@ numpy==2.4.1 openapi-pydantic==0.5.1 # via fastmcp opentelemetry-api==1.39.1 - # via - # opentelemetry-exporter-prometheus - # opentelemetry-instrumentation - # opentelemetry-sdk - # opentelemetry-semantic-conventions - # pydocket -opentelemetry-exporter-prometheus==0.60b1 # via pydocket -opentelemetry-instrumentation==0.60b1 - # via pydocket -opentelemetry-sdk==1.39.1 - # via opentelemetry-exporter-prometheus -opentelemetry-semantic-conventions==0.60b1 - # via - # opentelemetry-instrumentation - # opentelemetry-sdk -orjson==3.11.6 +orjson==3.11.7 # via # mp-api (pyproject.toml) # pymatgen @@ -338,7 +331,6 @@ packaging==26.0 # fastmcp # lazy-loader # matplotlib - # opentelemetry-instrumentation # plotly # pytest # scikit-image @@ -351,7 +343,7 @@ pandas==2.3.3 # mpcontribs-client # pymatgen # seaborn -parso==0.8.5 +parso==0.8.6 # via jedi pathable==0.4.4 # via jsonschema-path @@ -384,9 +376,7 @@ pluggy==1.6.0 pre-commit==4.5.1 # via mp-api (pyproject.toml) prometheus-client==0.24.1 - # via - # opentelemetry-exporter-prometheus - # pydocket + # via pydocket prompt-toolkit==3.0.52 # via ipython psutil==7.2.2 @@ -404,7 +394,9 @@ py-key-value-aio[disk,keyring,memory,redis]==0.3.0 py-key-value-shared==0.3.0 # via py-key-value-aio pyarrow==23.0.0 - # via emmet-core + # via + # emmet-core + # mp-api (pyproject.toml) pybtex==0.25.1 # via # emmet-core @@ -430,7 +422,7 @@ pydantic-settings==2.12.0 # emmet-core # mcp # pymatgen-io-validation -pydocket==0.16.6 +pydocket==0.17.5 # via fastmcp pyflakes==3.4.0 # via flake8 @@ -443,7 +435,7 @@ pygments==2.19.2 # sphinx pyisemail==2.0.1 # via mpcontribs-client -pyjwt[crypto]==2.10.1 +pyjwt[crypto]==2.11.0 # via mcp pymatgen==2025.10.7 # via @@ -496,6 +488,7 @@ python-dateutil==2.9.0.post0 # botocore # bravado # bravado-core + # croniter # matplotlib # pandas python-dotenv==1.2.1 @@ -509,6 +502,7 @@ python-multipart==0.0.22 pytz==2025.2 # via # bravado-core + # croniter # pandas pyyaml==6.0.3 # via @@ -518,7 +512,7 @@ pyyaml==6.0.3 # pre-commit # pybtex # swagger-spec-validator -redis==7.1.0 +redis==7.1.1 # via # fakeredis # py-key-value-aio @@ -547,7 +541,7 @@ rfc3986-validator==0.1.1 # via jsonschema rfc3987-syntax==1.1.0 # via jsonschema -rich==14.3.1 +rich==14.3.2 # via # cyclopts # fastmcp @@ -587,10 +581,8 @@ seaborn==0.13.2 # via pymatgen-analysis-diffusion secretstorage==3.5.0 # via keyring -seekpath==2.2.0 +seekpath==2.2.1 # via emmet-core -semantic-version==2.10.0 - # via mpcontribs-client shapely==2.1.2 # via pymatgen-analysis-alloys shellingham==1.5.4 @@ -651,7 +643,7 @@ threadpoolctl==3.6.0 # via scikit-learn tifffile==2026.1.28 # via scikit-image -tqdm==4.67.1 +tqdm==4.67.3 # via # matminer # mpcontribs-client @@ -666,7 +658,7 @@ typer==0.21.1 # via pydocket types-requests==2.32.4.20260107 # via mp-api (pyproject.toml) -types-setuptools==80.10.0.20260124 +types-setuptools==81.0.0.20260209 # via mp-api (pyproject.toml) typing-extensions==4.15.0 # via @@ -680,8 +672,6 @@ typing-extensions==4.15.0 # mp-api (pyproject.toml) # mypy # opentelemetry-api - # opentelemetry-sdk - # opentelemetry-semantic-conventions # pint # py-key-value-shared # pydantic @@ -721,13 +711,13 @@ uvicorn==0.40.0 # mcp virtualenv==20.36.1 # via pre-commit -wcwidth==0.5.2 +wcwidth==0.6.0 # via prompt-toolkit webcolors==25.10.0 # via jsonschema websockets==16.0 # via fastmcp -wrapt==1.17.3 - # via opentelemetry-instrumentation +wrapt==2.1.1 + # via deprecated zipp==3.23.0 # via importlib-metadata