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Corentin
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vscode debug
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.vscode/launch.json

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"version": "0.2.0",
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"configurations": [
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{
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"name": "Python: Module",
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"name": "SDH Analysis",
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"type": "python",
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"request": "launch",
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"module": "myoquant",
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"justMyCode": true,
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"args": ["he-analysis", "debug_data/tritc_16.tif", "--stardist-path", "debug_data/dapi_16_labels.tif", "--cellpose-path", "debug_data/tritc_16_cp_masks.tif"],
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"args": ["sdh-analysis", "/home/corentin/code-project/MyoQuant/sample_img/sample_sdh.jpg", "--cellpose-path", "sample_img/sample_sdh_cellpose_mask.tiff"],
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},
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{
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"name": "HE Analysis",
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"type": "python",
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"request": "launch",
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"module": "myoquant",
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"justMyCode": true,
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"args": ["he-analysis", "sample_img/sample_he.jpg", "--stardist-path", "sample_img/sample_he_stardist_mask.tiff", "--cellpose-path", "sample_img/sample_he_cellpose_mask.tiff"],
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}
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]
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}

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