diff --git a/analyze/analyze.go b/analyze/analyze.go
index 31c64ea..6447b65 100644
--- a/analyze/analyze.go
+++ b/analyze/analyze.go
@@ -156,6 +156,10 @@ func (a *Analyzer) AnalyzeOrg(ctx context.Context, org string, numberOfGoroutine
 		}
 
 		for _, repo := range repoBatch.Repositories {
+			if a.Config.IsRepoExcluded(repo.GetRepoIdentifier()) {
+				obs.OnRepoSkipped(repo.GetRepoIdentifier(), "excluded")
+				continue
+			}
 			if a.Config.IgnoreForks && repo.GetIsFork() {
 				obs.OnRepoSkipped(repo.GetRepoIdentifier(), "fork")
 				continue
diff --git a/cmd/analyzeOrg.go b/cmd/analyzeOrg.go
index fb26784..0efbc44 100644
--- a/cmd/analyzeOrg.go
+++ b/cmd/analyzeOrg.go
@@ -7,7 +7,10 @@ import (
 	"github.com/spf13/viper"
 )
 
-var threads int
+var (
+	threads      int
+	excludeRepos []string
+)
 
 // analyzeOrgCmd represents the analyzeOrg command
 var analyzeOrgCmd = &cobra.Command{
@@ -24,6 +27,9 @@ Note: This command will scan all repositories in the organization except those t
 	Args: cobra.ExactArgs(1),
 	RunE: func(cmd *cobra.Command, args []string) error {
 		Token = viper.GetString("token")
+		if len(excludeRepos) > 0 {
+			config.ExcludeRepos = append(config.ExcludeRepos, excludeRepos...)
+		}
 		ctx := cmd.Context()
 		analyzer, err := GetAnalyzer(ctx, "analyze_org")
 		if err != nil {
@@ -52,8 +58,10 @@ func init() {
 
 	analyzeOrgCmd.Flags().IntVarP(&threads, "threads", "j", 2, "Parallelization factor for scanning organizations")
 	analyzeOrgCmd.Flags().BoolVarP(&config.IgnoreForks, "ignore-forks", "i", false, "Ignore forked repositories in the organization")
+	analyzeOrgCmd.Flags().StringSliceVarP(&excludeRepos, "exclude-repo", "e", nil, "Exclude specific repositories from organization scan (can be specified multiple times)")
 
 	viper.BindPFlag("token", analyzeOrgCmd.Flags().Lookup("token"))
 	viper.BindPFlag("ignoreForks", analyzeOrgCmd.Flags().Lookup("ignore-forks"))
+	_ = viper.BindPFlag("excludeRepos", analyzeOrgCmd.Flags().Lookup("exclude-repo"))
 	viper.BindEnv("token", "GH_TOKEN")
 }
diff --git a/models/config.go b/models/config.go
index 5a40b55..23b58c7 100644
--- a/models/config.go
+++ b/models/config.go
@@ -1,5 +1,7 @@
 package models
 
+import "strings"
+
 type ConfigSkip struct {
 	Purl  StringList `json:"purl,omitempty"`
 	Path  StringList `json:"path,omitempty"`
@@ -27,11 +29,26 @@ type Config struct {
 	AllowedRules        []string                          `json:"allowed_rules"`
 	Include             []ConfigInclude                   `json:"include"`
 	IgnoreForks         bool                              `json:"ignore_forks"`
+	ExcludeRepos        []string                          `json:"exclude_repos,omitempty"`
 	Quiet               bool                              `json:"quiet,omitempty"`
 	RulesConfig         map[string]map[string]interface{} `json:"rules_config"`
 	DisableVersionCheck bool                              `json:"disable_version_check,omitempty"`
 }
 
+func (c *Config) IsRepoExcluded(repoIdentifier string) bool {
+	if c == nil || len(c.ExcludeRepos) == 0 {
+		return false
+	}
+	parts := strings.Split(repoIdentifier, "/")
+	repoName := parts[len(parts)-1]
+	for _, excluded := range c.ExcludeRepos {
+		if strings.EqualFold(excluded, repoIdentifier) || strings.EqualFold(excluded, repoName) {
+			return true
+		}
+	}
+	return false
+}
+
 func DefaultConfig() *Config {
 	return &Config{}
 }
diff --git a/models/config_test.go b/models/config_test.go
new file mode 100644
index 0000000..70db99e
--- /dev/null
+++ b/models/config_test.go
@@ -0,0 +1,25 @@
+package models_test
+
+import (
+	"testing"
+
+	"github.com/boostsecurityio/poutine/models"
+	"github.com/stretchr/testify/assert"
+)
+
+func TestConfig_IsRepoExcluded(t *testing.T) {
+	cfg := &models.Config{
+		ExcludeRepos: []string{"org/repo1", "repo2", "org/Repo3"},
+	}
+
+	assert.True(t, cfg.IsRepoExcluded("org/repo1"))
+	assert.True(t, cfg.IsRepoExcluded("org/repo2"))
+	assert.True(t, cfg.IsRepoExcluded("org/repo3"))
+	assert.False(t, cfg.IsRepoExcluded("org/repo4"))
+
+	var nilCfg *models.Config
+	assert.False(t, nilCfg.IsRepoExcluded("org/repo1"))
+
+	emptyCfg := &models.Config{}
+	assert.False(t, emptyCfg.IsRepoExcluded("org/repo1"))
+}