The chosen all active cell has fitted parameters which use group apic:
These are usually defined by type (2nd column in SWC file) = 4, e.g.
|
1182 4 805.4424 477.8785 29.6638 0.2134 1181 |
but this is not present in the swc file for this cell:
https://github.com/OpenSourceBrain/AllenInstituteNeuroML/blob/pg_test/CellTypesDatabase/models/497233223/Sst-IRES-Cre_Ai14-165865.03.01.01_491119181_m.swc
The 3d view also suggests no apic:
http://celltypes.brain-map.org/experiment/morphology/464198958
So why is it used in the fit file??
The chosen all active cell has fitted parameters which use group apic:
AllenInstituteNeuroML/CellTypesDatabase/models/497233223/464198958_fit.json
Line 249 in af1a0ba
These are usually defined by type (2nd column in SWC file) = 4, e.g.
AllenInstituteNeuroML/CellTypesDatabase/models/483108201/Rbp4-Cre_KL100_Ai14-196623.04.01.01_491119548_m.swc
Line 1185 in af1a0ba
but this is not present in the swc file for this cell:
https://github.com/OpenSourceBrain/AllenInstituteNeuroML/blob/pg_test/CellTypesDatabase/models/497233223/Sst-IRES-Cre_Ai14-165865.03.01.01_491119181_m.swc
The 3d view also suggests no apic:
http://celltypes.brain-map.org/experiment/morphology/464198958
So why is it used in the fit file??