diff --git a/poetry.lock b/poetry.lock
index 7a020cbe..17010c2b 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -24,13 +24,13 @@ files = [
 
 [[package]]
 name = "astroid"
-version = "3.3.10"
+version = "3.3.11"
 description = "An abstract syntax tree for Python with inference support."
 optional = false
 python-versions = ">=3.9.0"
 files = [
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-    {file = "astroid-3.3.10.tar.gz", hash = "sha256:c332157953060c6deb9caa57303ae0d20b0fbdb2e59b4a4f2a6ba49d0a7961ce"},
+    {file = "astroid-3.3.11-py3-none-any.whl", hash = "sha256:54c760ae8322ece1abd213057c4b5bba7c49818853fc901ef09719a60dbf9dec"},
+    {file = "astroid-3.3.11.tar.gz", hash = "sha256:1e5a5011af2920c7c67a53f65d536d65bfa7116feeaf2354d8b94f29573bb0ce"},
 ]
 
 [package.dependencies]
@@ -67,13 +67,13 @@ dev = ["backports.zoneinfo", "freezegun (>=1.0,<2.0)", "jinja2 (>=3.0)", "pytest
 
 [[package]]
 name = "banana-hep"
-version = "0.6.15"
+version = "0.6.16"
 description = "Benchmark QCD physics"
 optional = false
-python-versions = "<3.13,>=3.9.0"
+python-versions = "<4.0,>=3.9"
 files = [
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+    {file = "banana_hep-0.6.16-py3-none-any.whl", hash = "sha256:cf809dd579f791aa5562a8ea6d274ecbcc5dad0423a253dd3b19d2512ad5b1d5"},
+    {file = "banana_hep-0.6.16.tar.gz", hash = "sha256:dc26cb644a43ba297d40d99eb321746388b91b327ebc3ed8a357a3cb669314c9"},
 ]
 
 [package.dependencies]
@@ -81,7 +81,7 @@ appdirs = ">=1.4.4,<2.0.0"
 click = ">=8.0.3,<9.0.0"
 ipython = ">=8.1.0,<9.0.0"
 matplotlib = ">=3.5.1,<4.0.0"
-numpy = ">=1.26.0,<2.0.0"
+numpy = ">=1.26"
 pandas = ">=2.1.4,<3.0.0"
 pendulum = ">=3.0.0,<4.0.0"
 PyYAML = ">=6.0,<7.0"
@@ -90,13 +90,13 @@ SQLAlchemy = ">=1.4.29,<2.0.0"
 
 [[package]]
 name = "certifi"
-version = "2025.4.26"
+version = "2025.7.14"
 description = "Python package for providing Mozilla's CA Bundle."
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 files = [
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-    {file = "certifi-2025.4.26.tar.gz", hash = "sha256:0a816057ea3cdefcef70270d2c515e4506bbc954f417fa5ade2021213bb8f0c6"},
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+    {file = "certifi-2025.7.14.tar.gz", hash = "sha256:8ea99dbdfaaf2ba2f9bac77b9249ef62ec5218e7c2b2e903378ed5fccf765995"},
 ]
 
 [[package]]
@@ -325,78 +325,99 @@ test-no-images = ["pytest", "pytest-cov", "pytest-rerunfailures", "pytest-xdist"
 
 [[package]]
 name = "coverage"
-version = "7.9.0"
+version = "7.10.1"
 description = "Code coverage measurement for Python"
 optional = false
 python-versions = ">=3.9"
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 [package.dependencies]
@@ -532,57 +553,57 @@ tests = ["pytest", "pytest-cov"]
 
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 [package.extras]
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 typing = ["typing-extensions"]
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 ]
 
 [package.dependencies]
@@ -1704,14 +1749,14 @@ test = ["pytest", "pytest-cov"]
 
 [[package]]
 name = "pineappl-cli"
-version = "1.0.0"
+version = "1.1.0"
 description = "Read, write, and query PineAPPL grids"
 optional = false
 python-versions = "*"
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 ]
 
 [[package]]
@@ -1786,21 +1831,22 @@ tests = ["pytest"]
 
 [[package]]
 name = "pybtex"
-version = "0.24.0"
+version = "0.25.1"
 description = "A BibTeX-compatible bibliography processor in Python"
 optional = false
-python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*"
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 files = [
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 ]
 
 [package.dependencies]
+importlib_metadata = {version = "*", markers = "python_version < \"3.10\""}
 latexcodec = ">=1.0.4"
 PyYAML = ">=3.01"
-six = "*"
 
 [package.extras]
+doc = ["sphinx"]
 test = ["pytest"]
 
 [[package]]
@@ -1820,13 +1866,13 @@ pybtex = ">=0.16"
 
 [[package]]
 name = "pygments"
-version = "2.19.1"
+version = "2.19.2"
 description = "Pygments is a syntax highlighting package written in Python."
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.extras]
@@ -1892,17 +1938,17 @@ dev = ["build", "flake8", "mypy", "pytest", "twine"]
 
 [[package]]
 name = "pyrepl"
-version = "0.11.3.post1"
+version = "0.11.4"
 description = "A library for building flexible command line interfaces"
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.extras]
-dev = ["pyrepl[tests]", "ruff (==0.9.3)"]
+dev = ["pyrepl[tests]", "ruff (==0.11.8)"]
 tests = ["pexpect", "pytest", "pytest-coverage", "pytest-timeout"]
 
 [[package]]
@@ -2598,13 +2644,13 @@ test = ["argcomplete (>=3.0.3)", "mypy (>=1.7.0)", "pre-commit", "pytest (>=7.0,
 
 [[package]]
 name = "typing-extensions"
-version = "4.14.0"
+version = "4.14.1"
 description = "Backported and Experimental Type Hints for Python 3.9+"
 optional = false
 python-versions = ">=3.9"
 files = [
-    {file = "typing_extensions-4.14.0-py3-none-any.whl", hash = "sha256:a1514509136dd0b477638fc68d6a91497af5076466ad0fa6c338e44e359944af"},
-    {file = "typing_extensions-4.14.0.tar.gz", hash = "sha256:8676b788e32f02ab42d9e7c61324048ae4c6d844a399eebace3d4979d75ceef4"},
+    {file = "typing_extensions-4.14.1-py3-none-any.whl", hash = "sha256:d1e1e3b58374dc93031d6eda2420a48ea44a36c2b4766a4fdeb3710755731d76"},
+    {file = "typing_extensions-4.14.1.tar.gz", hash = "sha256:38b39f4aeeab64884ce9f74c94263ef78f3c22467c8724005483154c26648d36"},
 ]
 
 [[package]]
@@ -2620,13 +2666,13 @@ files = [
 
 [[package]]
 name = "urllib3"
-version = "2.4.0"
+version = "2.5.0"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
 optional = false
 python-versions = ">=3.9"
 files = [
-    {file = "urllib3-2.4.0-py3-none-any.whl", hash = "sha256:4e16665048960a0900c702d4a66415956a584919c03361cac9f1df5c5dd7e813"},
-    {file = "urllib3-2.4.0.tar.gz", hash = "sha256:414bc6535b787febd7567804cc015fee39daab8ad86268f1310a9250697de466"},
+    {file = "urllib3-2.5.0-py3-none-any.whl", hash = "sha256:e6b01673c0fa6a13e374b50871808eb3bf7046c4b125b216f6bf1cc604cff0dc"},
+    {file = "urllib3-2.5.0.tar.gz", hash = "sha256:3fc47733c7e419d4bc3f6b3dc2b4f890bb743906a30d56ba4a5bfa4bbff92760"},
 ]
 
 [package.extras]
@@ -2687,4 +2733,4 @@ nnpdf = ["nnpdf-data"]
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.9,<3.13"
-content-hash = "52e39b613f6d3244a9c4a43aa48502ff499bd40315171a044b97035e3a311f14"
+content-hash = "a1c59cefc4df98796acf0e3a2ab8480507ff52d8652642cb505d1376738279d1"
diff --git a/pyproject.toml b/pyproject.toml
index 1c319c81..64dbdbd4 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -28,7 +28,7 @@ packages = [{ include = "pineko", from = "src" }]
 [tool.poetry.dependencies]
 python = ">=3.9,<3.13"
 eko = "^0.15.0"
-pineappl = "^1.0.0"
+pineappl = "^1.1.0"
 PyYAML = "^6.0"
 numpy = "^1.21.0"
 pandas = "^2.1"
@@ -59,7 +59,7 @@ pytest-cov = "^4.0.0"
 pytest-env = "^0.6.2"
 pylint = "^3.1.0"
 banana-hep = "^0.6.13"
-pineappl-cli = "^1.0.0"
+pineappl-cli = "^1.1.0"
 
 [tool.poetry.group.dev.dependencies]
 pdbpp = "^0.11.6"
diff --git a/src/pineko/evolve.py b/src/pineko/evolve.py
index 79b6cca0..bd62efaa 100644
--- a/src/pineko/evolve.py
+++ b/src/pineko/evolve.py
@@ -373,17 +373,15 @@ def prepare(operator, convolution_types):
                 opcard.configs.interpolation_polynomial_degree,
                 targetgrid=XGrid(x_grid),
             )
-            # rotate the input to evolution basis
-            op = manipulate.to_evol(op, source=True)
             check.check_grid_and_eko_compatible(grid, x_grid, q2, xif, max_as, max_al)
             info = pineappl.evolution.OperatorSliceInfo(
                 fac0=operator.mu20,
                 fac1=q2,
                 x0=operator.xgrid.tolist(),
                 x1=x_grid.tolist(),
-                pids0=basis_rotation.evol_basis_pids,
+                pids0=basis_rotation.flavor_basis_pids,
                 pids1=basis_rotation.flavor_basis_pids,
-                pid_basis=pineappl.pids.PidBasis.Evol,
+                pid_basis=pineappl.pids.PidBasis.Pdg,
                 convolution_types=convolution_types,
             )
             yield (info, op.operator)
@@ -402,6 +400,7 @@ def prepare(operator, convolution_types):
         ren1=ren_grid2,
         alphas=alphas_values,
     )
+    fktable.rotate_pid_basis(pineappl.pids.PidBasis.Evol)
 
     rich.print(f"Optimizing for {assumptions}")
     fktable.optimize(pineappl.fk_table.FkAssumptions(assumptions))