From e9644fa835d3166e0471b0b3c5721e5b3cbec046 Mon Sep 17 00:00:00 2001 From: EnfxcFCb6 Date: Wed, 9 Jul 2025 16:08:52 -0400 Subject: [PATCH 1/2] Standardized README to Markdown format --- README.md | 25 +++++++++++++++++++++++++ readme.txt | 29 ----------------------------- 2 files changed, 25 insertions(+), 29 deletions(-) create mode 100644 README.md delete mode 100644 readme.txt diff --git a/README.md b/README.md new file mode 100644 index 0000000..66c8e06 --- /dev/null +++ b/README.md @@ -0,0 +1,25 @@ +# README for Neural Network Models (mex files) + +This repository contains two neural network models (mex files) associated with the following paper: + +S. Cavallari, S. Panzeri and A. Mazzoni (2014) Comparison of the dynamics of neural interactions between current-based and conductance-based integrate-and-fire recurrent networks, *Frontiers in Neural Circuits*, 8:12. doi: 10.3389/fncir.2014.00012 + +Recurrent networks, each of two populations (excitatory and inhibitory) of randomly connected Leaky Integrate-and-Fire (LIF) neurons with either conductance-based synapses (COBN) or current-based synapses (CUBN) were studied. The activity of the LIF COBN model was compared with the activity of the associated model LIF CUBN. + +Instructions are provided in the ReadMe files in each model-associated subfolder, **LIF_COBN** and **LIF_CUBN**. + +If you have any questions about the implementation of these MATLAB models, which require compilation with mex, contact: +ste.cavallari@gmail.com + +Please cite the paper if you use the codes. + +--- + +### Changelog + +- 2014-07-09: Comments in `LIF_COBN/code_COBN.c`, `LIF_COBN/code_COBN.m`, `LIF_CUBN/code_CUBN.c`, `LIF_CUBN/code_CUBN.m` were enhanced. +- 2015-07-22: The code to generate the OU process has been added (`LIF_COBN/OU_process.m` and `LIF_CUBN/OU_process.m`) together with the instructions (`LIF_COBN/ReadMe_COBN` and `LIF_CUBN/ReadMe_CUBN`) to set the arguments to generate the data used in some figures of the paper. + +--- + +2025-07-09: Converted README to Markdown. \ No newline at end of file diff --git a/readme.txt b/readme.txt deleted file mode 100644 index 5f069e7..0000000 --- a/readme.txt +++ /dev/null @@ -1,29 +0,0 @@ -This is the readme for the two neural network models (mex file) associated with the following paper: - -S.Cavallari, S. Panzeri and A.Mazzoni (2014) Comparison of the -dynamics of neural interactions between current-based and conductance-based -integrate-and-fire recurrent networks, Frontiers in Neural Circuits -8:12. doi: 10.3389/fncir.2014.00012 - -Recurrent networks, each of two populations (excitatory and inhibitory) of -randomly connected Leaky Integrate-and-Fire (LIF) neurons with either -conductance-based synapses (COBN) or current-based synapses (CUBN) -were studied. The activity of the LIF COBN model were compared with the -activity of the associated model LIF CUBN. -Instructions are provided in the ReadMe files in each model associated sub folder, LIF_COBN and -LIF_CUBN. - -If you have any questions about the implementation of these matlab -models, which require compilation with mex, contact: -ste.cavallari@gmail.com - -Please cite the paper if you use the codes. - - -20140709 Comments in LIF_COBN/code_COBN.c, LIF_COBN/code_COBN.m, -LIF_CUBN/code_CUBN.c, LIF_CUBN/code_CUBN.m were enhanced. - -20150722 The code to generate the OU process has been added (LIF_COBN/OU_process.m -and LIF_CUBN/OU_process.m) together with the instructions -(LIF_COBN/ReadMe_COBN and LIF_CUBN/ReadMe_CUBN) -to set the arguments to generate the data used in some figures of the paper. From 37852237ad99318b6719415e56eeb3b8115f1d51 Mon Sep 17 00:00:00 2001 From: rsakai Date: Thu, 10 Jul 2025 15:07:49 -0400 Subject: [PATCH 2/2] Update README.md --- README.md | 5 +---- 1 file changed, 1 insertion(+), 4 deletions(-) diff --git a/README.md b/README.md index 66c8e06..cbebf76 100644 --- a/README.md +++ b/README.md @@ -19,7 +19,4 @@ Please cite the paper if you use the codes. - 2014-07-09: Comments in `LIF_COBN/code_COBN.c`, `LIF_COBN/code_COBN.m`, `LIF_CUBN/code_CUBN.c`, `LIF_CUBN/code_CUBN.m` were enhanced. - 2015-07-22: The code to generate the OU process has been added (`LIF_COBN/OU_process.m` and `LIF_CUBN/OU_process.m`) together with the instructions (`LIF_COBN/ReadMe_COBN` and `LIF_CUBN/ReadMe_CUBN`) to set the arguments to generate the data used in some figures of the paper. - ---- - -2025-07-09: Converted README to Markdown. \ No newline at end of file +- 2025-07-09: Converted README to Markdown.