Add BASH file for converting SuiteSparse matrices

Author: BenBrock

examples/convert_ssmc.sh

@@ -0,0 +1,41 @@
+
+convert_ssmc() {
+  echo "unpacking $1"
+  fpath=$1
+  fname=`basename ${fpath}`
+  directory=`dirname ${fpath}`
+  tar -xf $fpath -C $directory
+
+  matrix_name=${fname/.tar.gz/}
+
+  main_matrix=$directory/$matrix_name/$matrix_name.mtx
+
+  dest_file=$directory/$matrix_name.coo.bsp.h5
+
+  # echo "dest file ${dest_file}"
+
+  # echo "Primary matrix is \"${main_matrix}\" -> ${dest_file}/root"
+  ./convert_binsparse ${main_matrix} ${dest_file} COO
+
+  for secondary_matrix in $directory/$matrix_name/${matrix_name}_*.mtx
+  do
+    # echo "Secondary matrix \"${secondary_matrix}\""
+    secondary_name=`basename ${secondary_matrix}`
+    secondary_name=${secondary_name/.mtx/}
+    secondary_name=${secondary_name/${matrix_name}_/}
+    ./convert_binsparse ${secondary_matrix} ${dest_file} COO ${secondary_name}
+  done
+
+  for text_file in $directory/$matrix_name/${matrix_name}_*.txt
+  do
+    #echo "Text file \"${text_file}\""
+    secondary_name=`basename ${text_file}`
+    secondary_name=${secondary_name/.txt/}
+    secondary_name=${secondary_name/${matrix_name}_/}
+    ./text2hdf5 ${text_file} ${dest_file} ${secondary_name}
+  done
+
+  rm -r ${directory}/${matrix_name}
+}
+
+convert_ssmc $1