From 55d06fdd014c955dcc96fc81c93244a2f880a049 Mon Sep 17 00:00:00 2001
From: trz42 <12829274+trz42@users.noreply.github.com>
Date: Sat, 25 Jul 2026 13:42:54 +0000
Subject: [PATCH] update overview of available software
---
docs/available_software/detail/Pysam.md | 3 +-
docs/available_software/detail/SMC++.md | 53 ++++++++++++++++++++++++
docs/available_software/detail/mpreal.md | 49 ++++++++++++++++++++++
docs/available_software/detail/tqdm.md | 3 +-
mkdocs.yml | 2 +-
5 files changed, 107 insertions(+), 3 deletions(-)
create mode 100644 docs/available_software/detail/SMC++.md
create mode 100644 docs/available_software/detail/mpreal.md
diff --git a/docs/available_software/detail/Pysam.md b/docs/available_software/detail/Pysam.md
index e4d436da6f..938774293f 100644
--- a/docs/available_software/detail/Pysam.md
+++ b/docs/available_software/detail/Pysam.md
@@ -24,7 +24,7 @@ json_ld:
ratingValue: 5
softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
on your system
- softwareVersion: '[''0.22.0'', ''0.21.0'']'
+ softwareVersion: '[''0.23.3'', ''0.22.0'', ''0.21.0'']'
url: https://github.com/pysam-developers/pysam
---
# Pysam
@@ -40,5 +40,6 @@ Pysam is a python module for reading and manipulating Samfiles.
|Pysam version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
| --- | --- | --- | --- | --- |
+|0.23.3|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`, `zen5`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2025.06|`Pysam/0.23.3-GCC-14.3.0`|
|0.22.0|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2023.06|`Pysam/0.22.0-GCC-12.3.0`|
|0.21.0|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2023.06|`Pysam/0.21.0-GCC-12.2.0`|
\ No newline at end of file
diff --git a/docs/available_software/detail/SMC++.md b/docs/available_software/detail/SMC++.md
new file mode 100644
index 0000000000..18d39e1416
--- /dev/null
+++ b/docs/available_software/detail/SMC++.md
@@ -0,0 +1,53 @@
+---
+json_ld:
+ '@context': https://schema.org
+ '@type': SoftwareApplication
+ applicationCategory: DeveloperApplication
+ description: SMC++ is a program for estimating the size history of populations from
+ whole genome sequence data.
+ license: Not confirmed
+ name: SMC++
+ offers:
+ '@type': Offer
+ price: 0
+ operatingSystem: LINUX
+ review:
+ '@type': Review
+ author:
+ '@type': Organization
+ name: EESSI
+ reviewBody: Application has been successfully made available on all architectures
+ supported by EESSI
+ reviewRating:
+ '@type': Rating
+ ratingValue: 5
+ softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
+ on your system
+ softwareVersion: '[''1.15.4'']'
+ url: https://github.com/popgenmethods/smcpp
+---
+# SMC++
+
+
+SMC++ is a program for estimating the size history of populations from whole genome sequence data.
+
+homepage: [https://github.com/popgenmethods/smcpp](https://github.com/popgenmethods/smcpp)
+
+## Available installations
+
+
+|SMC++ version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
+| --- | --- | --- | --- | --- |
+|1.15.4|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`, `zen5`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2025.06|`SMC++/1.15.4-gfbf-2025b`|
+
+## Extensions
+
+Overview of extensions included in SMC++ installations
+
+
+### smcpp
+
+
+|`smcpp` version|SMC++ modules that include it|
+| --- | --- |
+|1.15.4|`SMC++/1.15.4-gfbf-2025b`|
\ No newline at end of file
diff --git a/docs/available_software/detail/mpreal.md b/docs/available_software/detail/mpreal.md
new file mode 100644
index 0000000000..bee8058bf3
--- /dev/null
+++ b/docs/available_software/detail/mpreal.md
@@ -0,0 +1,49 @@
+---
+json_ld:
+ '@context': https://schema.org
+ '@type': SoftwareApplication
+ applicationCategory: DeveloperApplication
+ description: 'MPFR C++ (MPREAL): Multiple precision floating point
+
+ arithmetic library for C++.
+
+ Thread-safe, cross-platform (MSVC, GCC, ICC), one-header C++ library.
+
+ Supports C++11 features if available, C++03 compatible otherwise.'
+ license: Not confirmed
+ name: mpreal
+ offers:
+ '@type': Offer
+ price: 0
+ operatingSystem: LINUX
+ review:
+ '@type': Review
+ author:
+ '@type': Organization
+ name: EESSI
+ reviewBody: Application has been successfully made available on all architectures
+ supported by EESSI
+ reviewRating:
+ '@type': Rating
+ ratingValue: 5
+ softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
+ on your system
+ softwareVersion: '[''3.7.2'']'
+ url: https://github.com/advanpix/mpreal
+---
+# mpreal
+
+
+MPFR C++ (MPREAL): Multiple precision floating point
+arithmetic library for C++.
+Thread-safe, cross-platform (MSVC, GCC, ICC), one-header C++ library.
+Supports C++11 features if available, C++03 compatible otherwise.
+
+homepage: [https://github.com/advanpix/mpreal](https://github.com/advanpix/mpreal)
+
+## Available installations
+
+
+|mpreal version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
+| --- | --- | --- | --- | --- |
+|3.7.2|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`, `zen5`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2025.06|`mpreal/3.7.2`|
\ No newline at end of file
diff --git a/docs/available_software/detail/tqdm.md b/docs/available_software/detail/tqdm.md
index 551d582dc7..cc04e8407a 100644
--- a/docs/available_software/detail/tqdm.md
+++ b/docs/available_software/detail/tqdm.md
@@ -22,7 +22,7 @@ json_ld:
ratingValue: 5
softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
on your system
- softwareVersion: '[''4.66.2'', ''4.66.1'', ''4.64.1'']'
+ softwareVersion: '[''4.67.1'', ''4.66.2'', ''4.66.1'', ''4.64.1'']'
url: https://github.com/tqdm/tqdm
---
# tqdm
@@ -37,6 +37,7 @@ A fast, extensible progress bar for Python and CLI
|tqdm version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
| --- | --- | --- | --- | --- |
+|4.67.1|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`, `zen5`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2025.06|`tqdm/4.67.1-GCCcore-14.3.0`|
|4.66.2|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2023.06|`tqdm/4.66.2-GCCcore-13.2.0`|
|4.66.1|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2023.06|`tqdm/4.66.1-GCCcore-12.3.0`|
|4.64.1|`generic`: `aarch64`, `x86_64`
Arm: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`
AMD: `zen2`, `zen3`, `zen4`
Intel: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`
|*(none)*|2023.06|`tqdm/4.64.1-GCCcore-12.2.0`|
\ No newline at end of file
diff --git a/mkdocs.yml b/mkdocs.yml
index f0e63e5d0d..9a3358b974 100644
--- a/mkdocs.yml
+++ b/mkdocs.yml
@@ -215,7 +215,7 @@ extra:
- icon: fontawesome/brands/twitter
link: https://twitter.com/eessi_hpc
# this gets auto-updated via update_generated_time.sh script run in update_available_software.yml action
- generated_time: "Thu, 23 Jul 2026 at 03:17:37 UTC"
+ generated_time: "Sat, 25 Jul 2026 at 13:42:53 UTC"
slack_invite_url: "https://join.slack.com/t/eessi-hpc/shared_invite/zt-2wg10p26d-m_CnRB89xQq3zk9qxf1k3g"
extra_javascript:
# mermaid diagram