diff --git a/cmd/baton-sql-server/main.go b/cmd/baton-sql-server/main.go
index 714b83a1..1da538eb 100644
--- a/cmd/baton-sql-server/main.go
+++ b/cmd/baton-sql-server/main.go
@@ -5,6 +5,8 @@ import (
 	"fmt"
 	"os"
 
+	"path/filepath"
+
 	config "github.com/conductorone/baton-sdk/pkg/config"
 	"github.com/conductorone/baton-sdk/pkg/connectorbuilder"
 	"github.com/conductorone/baton-sdk/pkg/types"
@@ -16,10 +18,25 @@ import (
 
 var version = "dev"
 
+func getConfigDir(name string) string {
+	return filepath.Join(os.Getenv("PROGRAMDATA"), "ConductorOne", name)
+}
+
 func main() {
 	ctx := context.Background()
 
-	_, cmd, err := config.DefineConfiguration(ctx, "baton-sql-server", getConnector, cfg)
+	connectorName := "baton-sql-server"
+	configPath := os.Getenv("BATON_CONFIG_PATH")
+	if configPath == "" && os.Getenv("PROGRAMDATA") != "" {
+		// Set BATON_CONFIG_PATH so that if we're running as a windows service, we use the correct config file
+		err := os.Setenv("BATON_CONFIG_PATH", filepath.Join(getConfigDir(connectorName), "config.yaml"))
+		if err != nil {
+			fmt.Fprintln(os.Stderr, err.Error())
+			os.Exit(1)
+		}
+	}
+
+	_, cmd, err := config.DefineConfiguration(ctx, connectorName, getConnector, cfg)
 	if err != nil {
 		fmt.Fprintln(os.Stderr, err.Error())
 		os.Exit(1)