diff --git a/templates/galaxy/config/tpv_rules_meta.yml.j2 b/templates/galaxy/config/tpv_rules_meta.yml.j2 index 6ed18b2..2359fef 100644 --- a/templates/galaxy/config/tpv_rules_meta.yml.j2 +++ b/templates/galaxy/config/tpv_rules_meta.yml.j2 @@ -62,6 +62,13 @@ tools: cores: int(job.get_param_values(app)['__job_resource']['cores']) context: walltime: "{int(job.get_param_values(app)['__job_resource']['time'])}" +# DEMON: the highmem is not needed in all cases -> need to figure out how to check if needed mem is over 180 GB + toolshed.g2.bx.psu.edu/repos/iuc/kraken2/kraken2/.*: + context: + queue: elixircz + scheduling: + require: + - highmem toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_annotatebed/.*: context: walltime: 48