diff --git a/.github/workflows/biosimdb_interface_project-ci.yaml b/.github/workflows/biosimdb_interface_project-ci.yaml
index c8560de..ec892cf 100644
--- a/.github/workflows/biosimdb_interface_project-ci.yaml
+++ b/.github/workflows/biosimdb_interface_project-ci.yaml
@@ -86,7 +86,7 @@ jobs:
       - name: Set up Python 3.14
         uses: actions/setup-python@83679a892e2d95755f2dac6acb0bfd1e9ac5d548 # v6.1.0
         with:
-          python-version: 3.14.0
+          python-version: 3.14.7
       - name: Install python dependencies
         run: |
           pip install --upgrade pip
@@ -102,7 +102,7 @@ jobs:
       - name: Set up Python 3.14
         uses: actions/setup-python@83679a892e2d95755f2dac6acb0bfd1e9ac5d548 # v6.1.0
         with:
-          python-version: 3.14.0
+          python-version: 3.14.7
       - name: Install python dependencies
         run: |
           pip install --upgrade pip
diff --git a/.github/workflows/release.yaml b/.github/workflows/release.yaml
index 71c40fc..9fcda96 100644
--- a/.github/workflows/release.yaml
+++ b/.github/workflows/release.yaml
@@ -23,7 +23,7 @@ jobs:
     - name: Set up Python
       uses: actions/setup-python@83679a892e2d95755f2dac6acb0bfd1e9ac5d548 # v6.1.0
       with:
-        python-version: 3.14.0
+        python-version: 3.14.7
 
     - name: Get latest release from pip
       id: latestreleased
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index ab73413..f6ccc82 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -1,6 +1,6 @@
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v5.0.0
+    rev: v6.0.0
     hooks:
       - id: end-of-file-fixer
       - id: mixed-line-ending
@@ -10,13 +10,13 @@ repos:
       - id: debug-statements
 
   - repo: https://github.com/asottile/pyupgrade
-    rev: v3.19.1
+    rev: v3.21.2
     hooks:
       - id: pyupgrade
         args: ["--py312-plus"]
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.11.10
+    rev: v0.16.3
     hooks:
       - id: ruff
         args: [--fix]