From 21f1b364bbb8e52e650db2063c735342c7266ccc Mon Sep 17 00:00:00 2001 From: "Tim Triche, Jr." Date: Wed, 19 Nov 2025 15:20:50 -0500 Subject: [PATCH 1/2] Update package version from 1.0.1 to 1.1 add a header for the items that are done by a human vs build bot. --- docs/package-review-checklist.md | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/docs/package-review-checklist.md b/docs/package-review-checklist.md index 0d589f4..95293d5 100644 --- a/docs/package-review-checklist.md +++ b/docs/package-review-checklist.md @@ -1,6 +1,6 @@ # Package Review Checklist {#review-checklist} -**Version 1.0.1** +**Version 1.1** This checklist is intended to aid and guide the reviewer through the review process. @@ -65,6 +65,9 @@ Refer to the [DESCRIPTION](https://contributions.bioconductor.org/description.ht - [ ] Citation file (if present) in correct format (`readCitationFile("inst/CITATION")` without error). + + +# Subjective criteria / human reviewer specific ## Package data From f9ac3e754a367f7c74920179d793d9bd77c81f3d Mon Sep 17 00:00:00 2001 From: "Tim Triche, Jr." Date: Wed, 19 Nov 2025 15:34:42 -0500 Subject: [PATCH 2/2] Add documentation requirement for inst data manipulation Added checklist item for documenting data manipulation in R scripts. --- docs/package-review-checklist.md | 1 + 1 file changed, 1 insertion(+) diff --git a/docs/package-review-checklist.md b/docs/package-review-checklist.md index 95293d5..cd04ae7 100644 --- a/docs/package-review-checklist.md +++ b/docs/package-review-checklist.md @@ -74,6 +74,7 @@ Refer to the [DESCRIPTION](https://contributions.bioconductor.org/description.ht - [ ] Included data not too large. Need for separate data package? - [ ] Exported data and the `data/` directory has correct format, is compressed and documented. - [ ] Raw data in `inst/extdata/` directory. Small enough to justify inclusion in package? +- [ ] For data in `inst/extdata/`, is any manipulation required documented in (e.g.) R scripts? - [ ] If data downloaded from web: really necessary? `BiocFileCache` used? ## Documentation